Description

Ensembl ID MGP_AKRJ_G0016568 Gene ID Accession -
Symbol Tdrd5 Alias - Full Name tudor domain containing 5
Status Confidence Length 48881 bases Strand Minus strand
Position 1 : 159451010 - 159499890 RNA binding domain OST-HTH , TUDOR
Summary N.A.

RNA binding domains (RBDs)

Protein Domain Pfam ID E-value Domain number
MGP_AKRJ_P0022742 OST-HTH PF12872 1.9e-30 1
MGP_AKRJ_P0022742 OST-HTH PF12872 1.9e-30 2
MGP_AKRJ_P0022742 OST-HTH PF12872 1.9e-30 3
MGP_AKRJ_P0022742 TUDOR PF00567 3.9e-20 4
MGP_AKRJ_P0022743 OST-HTH PF12872 3.9e-20 1
MGP_AKRJ_P0022743 OST-HTH PF12872 3.9e-20 2
MGP_AKRJ_P0022743 TUDOR PF00567 3.4e-20 3
MGP_AKRJ_P0022746 OST-HTH PF12872 1.9e-10 1

RNA binding proteomes (RBPomes)

Pubmed ID Full Name Cell Author Time Doi

Literatures on RNA binding capacity

Pubmed ID Title Author Time Journal

Transcripts

Name Transcript ID bp Protein Translation ID
Tdrd5-001 MGP_AKRJ_T0022742 3754 1040aa MGP_AKRJ_P0022742"/note="transcript_id=MGP_AKRJ_T0022742
- MGP_AKRJ_T0022743 3205 963aa MGP_AKRJ_P0022743"/note="transcript_id=MGP_AKRJ_T0022743
- MGP_AKRJ_T0022744 268 No protein -
- MGP_AKRJ_T0022745 3675 No protein -
- MGP_AKRJ_T0022746 618 195aa MGP_AKRJ_P0022746"/note="transcript_id=MGP_AKRJ_T0022746

Pathways

Pathway ID Pathway Name Source

Phenotypes

ensgID Trait pValue Pubmed ID

GWAS

ensgIDSNPChromosomePosition TraitPubmedIDOr or BEAT EFO ID

Protein-Protein Interaction (PPI)

Paralogs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
MGP_AKRJ_G0016568mus_musculus_akrjMGP_AKRJ_P005216223.293511.6041mus_musculus_akrjMGP_AKRJ_P002274226.2513.0769
MGP_AKRJ_G0016568mus_musculus_akrjMGP_AKRJ_P006215936.610221.0169mus_musculus_akrjMGP_AKRJ_P002274220.769211.9231
MGP_AKRJ_G0016568mus_musculus_akrjMGP_AKRJ_P004772417.89238.99297mus_musculus_akrjMGP_AKRJ_P002274236.730818.4615
MGP_AKRJ_G0016568mus_musculus_akrjMGP_AKRJ_P006551720.554110.277mus_musculus_akrjMGP_AKRJ_P002274222.115411.0577

Orthologs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
MGP_AKRJ_G0016568mus_musculus_akrjMGP_AKRJ_P002274299.615499.5192mus_musculus_129s1svimjMGP_129S1SvImJ_P002279799.615499.5192
MGP_AKRJ_G0016568mus_musculus_akrjMGP_AKRJ_P0022742100100mus_musculus_ajMGP_AJ_P0022774100100
MGP_AKRJ_G0016568mus_musculus_akrjMGP_AKRJ_P0022742100100mus_musculus_balbcjMGP_BALBcJ_P0022743100100
MGP_AKRJ_G0016568mus_musculus_akrjMGP_AKRJ_P002274298.076997.4038mus_caroliMGP_CAROLIEiJ_P002053298.64697.9691
MGP_AKRJ_G0016568mus_musculus_akrjMGP_AKRJ_P0022742100100mus_musculus_c3hhejMGP_C3HHeJ_P0022552100100
MGP_AKRJ_G0016568mus_musculus_akrjMGP_AKRJ_P002274299.711599.6154mus_musculus_lpjMGP_LPJ_P002272199.711599.6154
MGP_AKRJ_G0016568mus_musculus_akrjMGP_AKRJ_P0022742100100mus_musculus_fvbnjMGP_FVBNJ_P0022629100100
MGP_AKRJ_G0016568mus_musculus_akrjMGP_AKRJ_P0022742100100mus_musculus_nodshiltjMGP_NODShiLtJ_P0022595100100
MGP_AKRJ_G0016568mus_musculus_akrjMGP_AKRJ_P002274299.615499.4231mus_musculus_c57bl6njMGP_C57BL6NJ_P002325699.615499.4231
MGP_AKRJ_G0016568mus_musculus_akrjMGP_AKRJ_P002274299.711599.6154mus_musculus_nzohlltjMGP_NZOHlLtJ_P002329399.711599.6154
MGP_AKRJ_G0016568mus_musculus_akrjMGP_AKRJ_P0022742100100mus_musculus_cbajMGP_CBAJ_P0022496100100
MGP_AKRJ_G0016568mus_musculus_akrjMGP_AKRJ_P0022742100100mus_musculus_dba2jMGP_DBA2J_P0022619100100
MGP_AKRJ_G0016568mus_musculus_akrjMGP_AKRJ_P002274299.711599.6154mus_musculus_wsbeijMGP_WSBEiJ_P002211499.711599.6154
MGP_AKRJ_G0016568mus_musculus_akrjMGP_AKRJ_P002274299.519298.9423mus_spicilegusENSMSIP0000001691391.67491.1426
MGP_AKRJ_G0016568mus_musculus_akrjMGP_AKRJ_P002274294.807791.4423rattus_norvegicusENSRNOP0000000535394.263990.9178
MGP_AKRJ_G0016568mus_musculus_akrjMGP_AKRJ_P002274299.230898.2692mus_spretusMGP_SPRETEiJ_P002159599.230898.2692
MGP_AKRJ_G0016568mus_musculus_akrjMGP_AKRJ_P002274299.615499.4231mus_musculusENSMUSP0000013729899.615499.4231
MGP_AKRJ_G0016568mus_musculus_akrjMGP_AKRJ_P002274299.807799.6154mus_musculus_casteijMGP_CASTEiJ_P002208399.807799.6154
MGP_AKRJ_G0016568mus_musculus_akrjMGP_AKRJ_P002274299.903899.8077mus_musculus_pwkphjMGP_PWKPhJ_P002180699.903899.8077
MGP_AKRJ_G0016568mus_musculus_akrjMGP_AKRJ_P002274295.865493.0769mus_pahariMGP_PahariEiJ_P007581095.589692.8092

Gene Ontology

Go ID Go term No. evidence Entries Species Category

Expression