RBP Type |
N.A. |
Diseases |
|
Drug |
|
Main interacting RNAs |
|
Moonlighting functions |
|
Localizations |
|
BulkPerturb-seq
|
|
Ensembl ID | MGP_AKRJ_G0016568 | Gene ID |
|
Accession |
- |
Symbol |
Tdrd5 |
Alias |
- |
Full Name |
tudor domain containing 5 |
Status |
Confidence |
Length |
48881 bases |
Strand |
Minus strand |
Position |
1 : 159451010 - 159499890 |
RNA binding domain |
OST-HTH , TUDOR |
Summary |
N.A. |
RNA binding domains (RBDs)
Protein |
Domain |
Pfam ID |
E-value |
Domain number |
MGP_AKRJ_P0022742 |
OST-HTH |
PF12872 |
1.9e-30 |
1 |
MGP_AKRJ_P0022742 |
OST-HTH |
PF12872 |
1.9e-30 |
2 |
MGP_AKRJ_P0022742 |
OST-HTH |
PF12872 |
1.9e-30 |
3 |
MGP_AKRJ_P0022742 |
TUDOR |
PF00567 |
3.9e-20 |
4 |
MGP_AKRJ_P0022743 |
OST-HTH |
PF12872 |
3.9e-20 |
1 |
MGP_AKRJ_P0022743 |
OST-HTH |
PF12872 |
3.9e-20 |
2 |
MGP_AKRJ_P0022743 |
TUDOR |
PF00567 |
3.4e-20 |
3 |
MGP_AKRJ_P0022746 |
OST-HTH |
PF12872 |
1.9e-10 |
1 |
RNA binding proteomes (RBPomes)
Pubmed ID |
Full Name |
Cell |
Author |
Time |
Doi |
Literatures on RNA binding capacity
Pubmed ID |
Title |
Author |
Time |
Journal |
Name |
Transcript ID |
bp |
Protein |
Translation ID |
Tdrd5-001 |
MGP_AKRJ_T0022742 |
3754 |
1040aa |
MGP_AKRJ_P0022742"/note="transcript_id=MGP_AKRJ_T0022742 |
- |
MGP_AKRJ_T0022743 |
3205 |
963aa |
MGP_AKRJ_P0022743"/note="transcript_id=MGP_AKRJ_T0022743 |
- |
MGP_AKRJ_T0022744 |
268 |
No protein |
- |
- |
MGP_AKRJ_T0022745 |
3675 |
No protein |
- |
- |
MGP_AKRJ_T0022746 |
618 |
195aa |
MGP_AKRJ_P0022746"/note="transcript_id=MGP_AKRJ_T0022746 |
Pathway ID |
Pathway Name |
Source |
| | |
ensgID |
Trait |
pValue |
Pubmed ID |
ensgID | SNP | Chromosome | Position |
Trait | PubmedID | Or or BEAT |
EFO ID |
Protein-Protein Interaction (PPI)
Ensembl ID |
Source |
Target |
Species |
Protein ID |
Perc_pos |
Perc_id |
Species |
Protein ID |
Perc_pos |
Perc_id |
MGP_AKRJ_G0016568 | mus_musculus_akrj | MGP_AKRJ_P0052162 | 23.2935 | 11.6041 | mus_musculus_akrj | MGP_AKRJ_P0022742 | 26.25 | 13.0769 |
MGP_AKRJ_G0016568 | mus_musculus_akrj | MGP_AKRJ_P0062159 | 36.6102 | 21.0169 | mus_musculus_akrj | MGP_AKRJ_P0022742 | 20.7692 | 11.9231 |
MGP_AKRJ_G0016568 | mus_musculus_akrj | MGP_AKRJ_P0047724 | 17.8923 | 8.99297 | mus_musculus_akrj | MGP_AKRJ_P0022742 | 36.7308 | 18.4615 |
MGP_AKRJ_G0016568 | mus_musculus_akrj | MGP_AKRJ_P0065517 | 20.5541 | 10.277 | mus_musculus_akrj | MGP_AKRJ_P0022742 | 22.1154 | 11.0577 |
Ensembl ID |
Source |
Target |
Species |
Protein ID |
Perc_pos |
Perc_id |
Species |
Protein ID |
Perc_pos |
Perc_id |
MGP_AKRJ_G0016568 | mus_musculus_akrj | MGP_AKRJ_P0022742 | 99.6154 | 99.5192 | mus_musculus_129s1svimj | MGP_129S1SvImJ_P0022797 | 99.6154 | 99.5192 |
MGP_AKRJ_G0016568 | mus_musculus_akrj | MGP_AKRJ_P0022742 | 100 | 100 | mus_musculus_aj | MGP_AJ_P0022774 | 100 | 100 |
MGP_AKRJ_G0016568 | mus_musculus_akrj | MGP_AKRJ_P0022742 | 100 | 100 | mus_musculus_balbcj | MGP_BALBcJ_P0022743 | 100 | 100 |
MGP_AKRJ_G0016568 | mus_musculus_akrj | MGP_AKRJ_P0022742 | 98.0769 | 97.4038 | mus_caroli | MGP_CAROLIEiJ_P0020532 | 98.646 | 97.9691 |
MGP_AKRJ_G0016568 | mus_musculus_akrj | MGP_AKRJ_P0022742 | 100 | 100 | mus_musculus_c3hhej | MGP_C3HHeJ_P0022552 | 100 | 100 |
MGP_AKRJ_G0016568 | mus_musculus_akrj | MGP_AKRJ_P0022742 | 99.7115 | 99.6154 | mus_musculus_lpj | MGP_LPJ_P0022721 | 99.7115 | 99.6154 |
MGP_AKRJ_G0016568 | mus_musculus_akrj | MGP_AKRJ_P0022742 | 100 | 100 | mus_musculus_fvbnj | MGP_FVBNJ_P0022629 | 100 | 100 |
MGP_AKRJ_G0016568 | mus_musculus_akrj | MGP_AKRJ_P0022742 | 100 | 100 | mus_musculus_nodshiltj | MGP_NODShiLtJ_P0022595 | 100 | 100 |
MGP_AKRJ_G0016568 | mus_musculus_akrj | MGP_AKRJ_P0022742 | 99.6154 | 99.4231 | mus_musculus_c57bl6nj | MGP_C57BL6NJ_P0023256 | 99.6154 | 99.4231 |
MGP_AKRJ_G0016568 | mus_musculus_akrj | MGP_AKRJ_P0022742 | 99.7115 | 99.6154 | mus_musculus_nzohlltj | MGP_NZOHlLtJ_P0023293 | 99.7115 | 99.6154 |
MGP_AKRJ_G0016568 | mus_musculus_akrj | MGP_AKRJ_P0022742 | 100 | 100 | mus_musculus_cbaj | MGP_CBAJ_P0022496 | 100 | 100 |
MGP_AKRJ_G0016568 | mus_musculus_akrj | MGP_AKRJ_P0022742 | 100 | 100 | mus_musculus_dba2j | MGP_DBA2J_P0022619 | 100 | 100 |
MGP_AKRJ_G0016568 | mus_musculus_akrj | MGP_AKRJ_P0022742 | 99.7115 | 99.6154 | mus_musculus_wsbeij | MGP_WSBEiJ_P0022114 | 99.7115 | 99.6154 |
MGP_AKRJ_G0016568 | mus_musculus_akrj | MGP_AKRJ_P0022742 | 99.5192 | 98.9423 | mus_spicilegus | ENSMSIP00000016913 | 91.674 | 91.1426 |
MGP_AKRJ_G0016568 | mus_musculus_akrj | MGP_AKRJ_P0022742 | 94.8077 | 91.4423 | rattus_norvegicus | ENSRNOP00000005353 | 94.2639 | 90.9178 |
MGP_AKRJ_G0016568 | mus_musculus_akrj | MGP_AKRJ_P0022742 | 99.2308 | 98.2692 | mus_spretus | MGP_SPRETEiJ_P0021595 | 99.2308 | 98.2692 |
MGP_AKRJ_G0016568 | mus_musculus_akrj | MGP_AKRJ_P0022742 | 99.6154 | 99.4231 | mus_musculus | ENSMUSP00000137298 | 99.6154 | 99.4231 |
MGP_AKRJ_G0016568 | mus_musculus_akrj | MGP_AKRJ_P0022742 | 99.8077 | 99.6154 | mus_musculus_casteij | MGP_CASTEiJ_P0022083 | 99.8077 | 99.6154 |
MGP_AKRJ_G0016568 | mus_musculus_akrj | MGP_AKRJ_P0022742 | 99.9038 | 99.8077 | mus_musculus_pwkphj | MGP_PWKPhJ_P0021806 | 99.9038 | 99.8077 |
MGP_AKRJ_G0016568 | mus_musculus_akrj | MGP_AKRJ_P0022742 | 95.8654 | 93.0769 | mus_pahari | MGP_PahariEiJ_P0075810 | 95.5896 | 92.8092 |
Go ID |
Go term |
No. evidence |
Entries |
Species |
Category |