RBP Type |
N.A. |
Diseases |
|
Drug |
|
Main interacting RNAs |
|
Moonlighting functions |
|
Localizations |
|
BulkPerturb-seq
|
|
Ensembl ID | MGP_AKRJ_G0016008 | Gene ID |
|
Accession |
- |
Symbol |
Nop58 |
Alias |
- |
Full Name |
NOP58 ribonucleoprotein |
Status |
Confidence |
Length |
34105 bases |
Strand |
Plus strand |
Position |
1 : 59209785 - 59243889 |
RNA binding domain |
Nop , NOP5NT |
Summary |
N.A. |
RNA binding domains (RBDs)
Protein |
Domain |
Pfam ID |
E-value |
Domain number |
MGP_AKRJ_P0020026 |
Nop |
PF01798 |
4.2e-81 |
1 |
MGP_AKRJ_P0020026 |
NOP5NT |
PF08156 |
1.3e-23 |
2 |
MGP_AKRJ_P0020030 |
Nop |
PF01798 |
1.1e-80 |
1 |
MGP_AKRJ_P0020030 |
NOP5NT |
PF08156 |
9.9e-24 |
2 |
MGP_AKRJ_P0020036 |
Nop |
PF01798 |
8.5e-43 |
1 |
MGP_AKRJ_P0020038 |
Nop |
PF01798 |
4.6e-40 |
1 |
MGP_AKRJ_P0020039 |
Nop |
PF01798 |
1.7e-37 |
1 |
MGP_AKRJ_P0020035 |
Nop |
PF01798 |
3.8e-13 |
1 |
MGP_AKRJ_P0020032 |
NOP5NT |
PF08156 |
1.4e-22 |
1 |
RNA binding proteomes (RBPomes)
Pubmed ID |
Full Name |
Cell |
Author |
Time |
Doi |
Literatures on RNA binding capacity
Pubmed ID |
Title |
Author |
Time |
Journal |
Name |
Transcript ID |
bp |
Protein |
Translation ID |
Nop58-003 |
MGP_AKRJ_T0020025 |
576 |
No protein |
- |
- |
MGP_AKRJ_T0020026 |
1713 |
444aa |
MGP_AKRJ_P0020026"/note="transcript_id=MGP_AKRJ_T0020026 |
- |
MGP_AKRJ_T0020027 |
639 |
28aa |
MGP_AKRJ_P0020027"/note="transcript_id=MGP_AKRJ_T0020027 |
- |
MGP_AKRJ_T0020028 |
653 |
No protein |
- |
- |
MGP_AKRJ_T0020029 |
725 |
No protein |
- |
- |
MGP_AKRJ_T0020030 |
9476 |
536aa |
MGP_AKRJ_P0020030"/note="transcript_id=MGP_AKRJ_T0020030 |
- |
MGP_AKRJ_T0020031 |
461 |
20aa |
MGP_AKRJ_P0020031"/note="transcript_id=MGP_AKRJ_T0020031 |
- |
MGP_AKRJ_T0020032 |
702 |
60aa |
MGP_AKRJ_P0020032"/note="transcript_id=MGP_AKRJ_T0020032 |
- |
MGP_AKRJ_T0020033 |
623 |
No protein |
- |
- |
MGP_AKRJ_T0020034 |
891 |
No protein |
- |
- |
MGP_AKRJ_T0020035 |
598 |
145aa |
MGP_AKRJ_P0020035"/note="transcript_id=MGP_AKRJ_T0020035 |
- |
MGP_AKRJ_T0020036 |
714 |
191aa |
MGP_AKRJ_P0020036"/note="transcript_id=MGP_AKRJ_T0020036 |
- |
MGP_AKRJ_T0020037 |
373 |
59aa |
MGP_AKRJ_P0020037"/note="transcript_id=MGP_AKRJ_T0020037 |
- |
MGP_AKRJ_T0020038 |
638 |
212aa |
MGP_AKRJ_P0020038"/note="transcript_id=MGP_AKRJ_T0020038 |
- |
MGP_AKRJ_T0020039 |
585 |
194aa |
MGP_AKRJ_P0020039"/note="transcript_id=MGP_AKRJ_T0020039 |
Pathway ID |
Pathway Name |
Source |
| | |
ensgID |
Trait |
pValue |
Pubmed ID |
ensgID | SNP | Chromosome | Position |
Trait | PubmedID | Or or BEAT |
EFO ID |
Protein-Protein Interaction (PPI)
Ensembl ID |
Source |
Target |
Species |
Protein ID |
Perc_pos |
Perc_id |
Species |
Protein ID |
Perc_pos |
Perc_id |
MGP_AKRJ_G0016008 | mus_musculus_akrj | MGP_AKRJ_P0057615 | 58.2375 | 37.931 | mus_musculus_akrj | MGP_AKRJ_P0020030 | 28.3582 | 18.4701 |
Ensembl ID |
Source |
Target |
Species |
Protein ID |
Perc_pos |
Perc_id |
Species |
Protein ID |
Perc_pos |
Perc_id |
MGP_AKRJ_G0016008 | mus_musculus_akrj | MGP_AKRJ_P0020030 | 100 | 99.8134 | mus_musculus_129s1svimj | MGP_129S1SvImJ_P0020096 | 100 | 99.8134 |
MGP_AKRJ_G0016008 | mus_musculus_akrj | MGP_AKRJ_P0020030 | 100 | 99.8134 | mus_musculus_aj | MGP_AJ_P0020071 | 100 | 99.8134 |
MGP_AKRJ_G0016008 | mus_musculus_akrj | MGP_AKRJ_P0020030 | 100 | 100 | mus_musculus_balbcj | MGP_BALBcJ_P0020019 | 100 | 100 |
MGP_AKRJ_G0016008 | mus_musculus_akrj | MGP_AKRJ_P0020030 | 99.8134 | 99.6269 | mus_caroli | MGP_CAROLIEiJ_P0017877 | 100 | 99.8131 |
MGP_AKRJ_G0016008 | mus_musculus_akrj | MGP_AKRJ_P0020030 | 100 | 99.8134 | mus_musculus_c3hhej | MGP_C3HHeJ_P0019848 | 100 | 99.8134 |
MGP_AKRJ_G0016008 | mus_musculus_akrj | MGP_AKRJ_P0020030 | 100 | 99.8134 | mus_musculus_lpj | MGP_LPJ_P0020000 | 100 | 99.8134 |
MGP_AKRJ_G0016008 | mus_musculus_akrj | MGP_AKRJ_P0020030 | 100 | 99.8134 | mus_musculus_fvbnj | MGP_FVBNJ_P0019924 | 100 | 99.8134 |
MGP_AKRJ_G0016008 | mus_musculus_akrj | MGP_AKRJ_P0020030 | 100 | 100 | mus_musculus_nodshiltj | MGP_NODShiLtJ_P0019892 | 100 | 100 |
MGP_AKRJ_G0016008 | mus_musculus_akrj | MGP_AKRJ_P0020030 | 100 | 99.8134 | mus_musculus_c57bl6nj | MGP_C57BL6NJ_P0020522 | 100 | 99.8134 |
MGP_AKRJ_G0016008 | mus_musculus_akrj | MGP_AKRJ_P0020030 | 100 | 100 | mus_musculus_nzohlltj | MGP_NZOHlLtJ_P0020578 | 100 | 100 |
MGP_AKRJ_G0016008 | mus_musculus_akrj | MGP_AKRJ_P0020030 | 100 | 99.8134 | mus_musculus_cbaj | MGP_CBAJ_P0019805 | 100 | 99.8134 |
MGP_AKRJ_G0016008 | mus_musculus_akrj | MGP_AKRJ_P0020030 | 100 | 99.8134 | mus_musculus_dba2j | MGP_DBA2J_P0019920 | 100 | 99.8134 |
MGP_AKRJ_G0016008 | mus_musculus_akrj | MGP_AKRJ_P0020030 | 100 | 100 | mus_musculus_wsbeij | MGP_WSBEiJ_P0019436 | 100 | 100 |
MGP_AKRJ_G0016008 | mus_musculus_akrj | MGP_AKRJ_P0020030 | 97.5746 | 97.3881 | mus_spicilegus | ENSMSIP00000011311 | 95.7875 | 95.6044 |
MGP_AKRJ_G0016008 | mus_musculus_akrj | MGP_AKRJ_P0020030 | 99.4403 | 99.0672 | rattus_norvegicus | ENSRNOP00000022676 | 99.8127 | 99.4382 |
MGP_AKRJ_G0016008 | mus_musculus_akrj | MGP_AKRJ_P0020030 | 100 | 100 | mus_spretus | MGP_SPRETEiJ_P0018886 | 100 | 100 |
MGP_AKRJ_G0016008 | mus_musculus_akrj | MGP_AKRJ_P0020030 | 100 | 99.8134 | mus_musculus | ENSMUSP00000140250 | 100 | 99.8134 |
MGP_AKRJ_G0016008 | mus_musculus_akrj | MGP_AKRJ_P0020030 | 100 | 100 | mus_musculus_casteij | MGP_CASTEiJ_P0019356 | 100 | 100 |
MGP_AKRJ_G0016008 | mus_musculus_akrj | MGP_AKRJ_P0020030 | 100 | 100 | mus_musculus_pwkphj | MGP_PWKPhJ_P0019114 | 100 | 100 |
MGP_AKRJ_G0016008 | mus_musculus_akrj | MGP_AKRJ_P0020030 | 100 | 100 | mus_pahari | MGP_PahariEiJ_P0073193 | 99.8138 | 99.8138 |
Go ID |
Go term |
No. evidence |
Entries |
Species |
Category |