Description

Ensembl ID MGP_AKRJ_G0016008 Gene ID Accession -
Symbol Nop58 Alias - Full Name NOP58 ribonucleoprotein
Status Confidence Length 34105 bases Strand Plus strand
Position 1 : 59209785 - 59243889 RNA binding domain Nop , NOP5NT
Summary N.A.

RNA binding domains (RBDs)

Protein Domain Pfam ID E-value Domain number
MGP_AKRJ_P0020026 Nop PF01798 4.2e-81 1
MGP_AKRJ_P0020026 NOP5NT PF08156 1.3e-23 2
MGP_AKRJ_P0020030 Nop PF01798 1.1e-80 1
MGP_AKRJ_P0020030 NOP5NT PF08156 9.9e-24 2
MGP_AKRJ_P0020036 Nop PF01798 8.5e-43 1
MGP_AKRJ_P0020038 Nop PF01798 4.6e-40 1
MGP_AKRJ_P0020039 Nop PF01798 1.7e-37 1
MGP_AKRJ_P0020035 Nop PF01798 3.8e-13 1
MGP_AKRJ_P0020032 NOP5NT PF08156 1.4e-22 1

RNA binding proteomes (RBPomes)

Pubmed ID Full Name Cell Author Time Doi

Literatures on RNA binding capacity

Pubmed ID Title Author Time Journal

Transcripts

Name Transcript ID bp Protein Translation ID
Nop58-003 MGP_AKRJ_T0020025 576 No protein -
- MGP_AKRJ_T0020026 1713 444aa MGP_AKRJ_P0020026"/note="transcript_id=MGP_AKRJ_T0020026
- MGP_AKRJ_T0020027 639 28aa MGP_AKRJ_P0020027"/note="transcript_id=MGP_AKRJ_T0020027
- MGP_AKRJ_T0020028 653 No protein -
- MGP_AKRJ_T0020029 725 No protein -
- MGP_AKRJ_T0020030 9476 536aa MGP_AKRJ_P0020030"/note="transcript_id=MGP_AKRJ_T0020030
- MGP_AKRJ_T0020031 461 20aa MGP_AKRJ_P0020031"/note="transcript_id=MGP_AKRJ_T0020031
- MGP_AKRJ_T0020032 702 60aa MGP_AKRJ_P0020032"/note="transcript_id=MGP_AKRJ_T0020032
- MGP_AKRJ_T0020033 623 No protein -
- MGP_AKRJ_T0020034 891 No protein -
- MGP_AKRJ_T0020035 598 145aa MGP_AKRJ_P0020035"/note="transcript_id=MGP_AKRJ_T0020035
- MGP_AKRJ_T0020036 714 191aa MGP_AKRJ_P0020036"/note="transcript_id=MGP_AKRJ_T0020036
- MGP_AKRJ_T0020037 373 59aa MGP_AKRJ_P0020037"/note="transcript_id=MGP_AKRJ_T0020037
- MGP_AKRJ_T0020038 638 212aa MGP_AKRJ_P0020038"/note="transcript_id=MGP_AKRJ_T0020038
- MGP_AKRJ_T0020039 585 194aa MGP_AKRJ_P0020039"/note="transcript_id=MGP_AKRJ_T0020039

Pathways

Pathway ID Pathway Name Source

Phenotypes

ensgID Trait pValue Pubmed ID

GWAS

ensgIDSNPChromosomePosition TraitPubmedIDOr or BEAT EFO ID

Protein-Protein Interaction (PPI)

Paralogs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
MGP_AKRJ_G0016008mus_musculus_akrjMGP_AKRJ_P005761558.237537.931mus_musculus_akrjMGP_AKRJ_P002003028.358218.4701

Orthologs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
MGP_AKRJ_G0016008mus_musculus_akrjMGP_AKRJ_P002003010099.8134mus_musculus_129s1svimjMGP_129S1SvImJ_P002009610099.8134
MGP_AKRJ_G0016008mus_musculus_akrjMGP_AKRJ_P002003010099.8134mus_musculus_ajMGP_AJ_P002007110099.8134
MGP_AKRJ_G0016008mus_musculus_akrjMGP_AKRJ_P0020030100100mus_musculus_balbcjMGP_BALBcJ_P0020019100100
MGP_AKRJ_G0016008mus_musculus_akrjMGP_AKRJ_P002003099.813499.6269mus_caroliMGP_CAROLIEiJ_P001787710099.8131
MGP_AKRJ_G0016008mus_musculus_akrjMGP_AKRJ_P002003010099.8134mus_musculus_c3hhejMGP_C3HHeJ_P001984810099.8134
MGP_AKRJ_G0016008mus_musculus_akrjMGP_AKRJ_P002003010099.8134mus_musculus_lpjMGP_LPJ_P002000010099.8134
MGP_AKRJ_G0016008mus_musculus_akrjMGP_AKRJ_P002003010099.8134mus_musculus_fvbnjMGP_FVBNJ_P001992410099.8134
MGP_AKRJ_G0016008mus_musculus_akrjMGP_AKRJ_P0020030100100mus_musculus_nodshiltjMGP_NODShiLtJ_P0019892100100
MGP_AKRJ_G0016008mus_musculus_akrjMGP_AKRJ_P002003010099.8134mus_musculus_c57bl6njMGP_C57BL6NJ_P002052210099.8134
MGP_AKRJ_G0016008mus_musculus_akrjMGP_AKRJ_P0020030100100mus_musculus_nzohlltjMGP_NZOHlLtJ_P0020578100100
MGP_AKRJ_G0016008mus_musculus_akrjMGP_AKRJ_P002003010099.8134mus_musculus_cbajMGP_CBAJ_P001980510099.8134
MGP_AKRJ_G0016008mus_musculus_akrjMGP_AKRJ_P002003010099.8134mus_musculus_dba2jMGP_DBA2J_P001992010099.8134
MGP_AKRJ_G0016008mus_musculus_akrjMGP_AKRJ_P0020030100100mus_musculus_wsbeijMGP_WSBEiJ_P0019436100100
MGP_AKRJ_G0016008mus_musculus_akrjMGP_AKRJ_P002003097.574697.3881mus_spicilegusENSMSIP0000001131195.787595.6044
MGP_AKRJ_G0016008mus_musculus_akrjMGP_AKRJ_P002003099.440399.0672rattus_norvegicusENSRNOP0000002267699.812799.4382
MGP_AKRJ_G0016008mus_musculus_akrjMGP_AKRJ_P0020030100100mus_spretusMGP_SPRETEiJ_P0018886100100
MGP_AKRJ_G0016008mus_musculus_akrjMGP_AKRJ_P002003010099.8134mus_musculusENSMUSP0000014025010099.8134
MGP_AKRJ_G0016008mus_musculus_akrjMGP_AKRJ_P0020030100100mus_musculus_casteijMGP_CASTEiJ_P0019356100100
MGP_AKRJ_G0016008mus_musculus_akrjMGP_AKRJ_P0020030100100mus_musculus_pwkphjMGP_PWKPhJ_P0019114100100
MGP_AKRJ_G0016008mus_musculus_akrjMGP_AKRJ_P0020030100100mus_pahariMGP_PahariEiJ_P007319399.813899.8138

Gene Ontology

Go ID Go term No. evidence Entries Species Category

Expression