Description

Ensembl ID MGP_AJ_G0031127 Gene ID Accession -
Symbol Mbd4 Alias - Full Name methyl-CpG binding domain protein 4
Status Confidence Length 12675 bases Strand Minus strand
Position 6 : 113938296 - 113950970 RNA binding domain MBD
Summary N.A.

RNA binding domains (RBDs)

Protein Domain Pfam ID E-value Domain number
MGP_AJ_P0079573 MBD PF01429 8.9e-20 1
MGP_AJ_P0079575 MBD PF01429 9.9e-20 1
MGP_AJ_P0079571 MBD PF01429 1.6e-19 1

RNA binding proteomes (RBPomes)

Pubmed ID Full Name Cell Author Time Doi

Literatures on RNA binding capacity

Pubmed ID Title Author Time Journal

Transcripts

Name Transcript ID bp Protein Translation ID
Mbd4-001 MGP_AJ_T0079571 3614 554aa MGP_AJ_P0079571"/note="transcript_id=MGP_AJ_T0079571
- MGP_AJ_T0079572 2064 No protein -
- MGP_AJ_T0079573 2924 365aa MGP_AJ_P0079573"/note="transcript_id=MGP_AJ_T0079573
- MGP_AJ_T0079574 669 175aa MGP_AJ_P0079574"/note="transcript_id=MGP_AJ_T0079574
- MGP_AJ_T0079575 2415 386aa MGP_AJ_P0079575"/note="transcript_id=MGP_AJ_T0079575

Pathways

Pathway ID Pathway Name Source

Phenotypes

ensgID Trait pValue Pubmed ID

GWAS

ensgIDSNPChromosomePosition TraitPubmedIDOr or BEAT EFO ID

Protein-Protein Interaction (PPI)

Paralogs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
MGP_AJ_G0031127mus_musculus_ajMGP_AJ_P009659737.924221.7565mus_musculus_ajMGP_AJ_P007957134.29619.6751

Orthologs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
MGP_AJ_G0031127mus_musculus_ajMGP_AJ_P007957197.653496.7509mus_caroliMGP_CAROLIEiJ_P007559995.92295.0355
MGP_AJ_G0031127mus_musculus_ajMGP_AJ_P007957199.097598.7365mus_musculus_cbajMGP_CBAJ_P007909999.097598.7365
MGP_AJ_G0031127mus_musculus_ajMGP_AJ_P007957162.635459.5668mus_pahariMGP_PahariEiJ_P005179886.967482.7068
MGP_AJ_G0031127mus_musculus_ajMGP_AJ_P007957199.097598.7365mus_musculus_akrjMGP_AKRJ_P007949499.097598.7365
MGP_AJ_G0031127mus_musculus_ajMGP_AJ_P0079571100100mus_musculusENSMUSP00000032469100100
MGP_AJ_G0031127mus_musculus_ajMGP_AJ_P0079571100100mus_musculus_c57bl6njMGP_C57BL6NJ_P0079989100100
MGP_AJ_G0031127mus_musculus_ajMGP_AJ_P007957110099.8195mus_musculus_129s1svimjMGP_129S1SvImJ_P007949910099.8195
MGP_AJ_G0031127mus_musculus_ajMGP_AJ_P0079571100100mus_musculus_fvbnjMGP_FVBNJ_P0079136100100
MGP_AJ_G0031127mus_musculus_ajMGP_AJ_P007957110099.8195mus_musculus_dba2jMGP_DBA2J_P007925310099.8195
MGP_AJ_G0031127mus_musculus_ajMGP_AJ_P007957110099.8195mus_musculus_lpjMGP_LPJ_P007928310099.8195
MGP_AJ_G0031127mus_musculus_ajMGP_AJ_P007957199.097598.7365mus_musculus_c3hhejMGP_C3HHeJ_P007778399.097598.7365
MGP_AJ_G0031127mus_musculus_ajMGP_AJ_P007957198.014496.9314mus_spretusMGP_SPRETEiJ_P007867098.191797.1067
MGP_AJ_G0031127mus_musculus_ajMGP_AJ_P007957199.819599.8195mus_musculus_wsbeijMGP_WSBEiJ_P007824499.819599.8195
MGP_AJ_G0031127mus_musculus_ajMGP_AJ_P007957199.097598.7365mus_musculus_pwkphjMGP_PWKPhJ_P007915199.097598.7365
MGP_AJ_G0031127mus_musculus_ajMGP_AJ_P007957199.63999.639mus_musculus_casteijMGP_CASTEiJ_P007972599.63999.639
MGP_AJ_G0031127mus_musculus_ajMGP_AJ_P007957187.725683.3935rattus_norvegicusENSRNOP0000009200682.372978.3051
MGP_AJ_G0031127mus_musculus_ajMGP_AJ_P0079571100100mus_musculus_balbcjMGP_BALBcJ_P0079513100100
MGP_AJ_G0031127mus_musculus_ajMGP_AJ_P007957198.91798.1949mus_spicilegusENSMSIP0000000079198.91798.1949
MGP_AJ_G0031127mus_musculus_ajMGP_AJ_P007957110099.8195mus_musculus_nzohlltjMGP_NZOHlLtJ_P008023710099.8195
MGP_AJ_G0031127mus_musculus_ajMGP_AJ_P007957110099.8195mus_musculus_nodshiltjMGP_NODShiLtJ_P007914010099.8195

Gene Ontology

Go ID Go term No. evidence Entries Species Category

Expression