RBP Type |
N.A. |
Diseases |
|
Drug |
|
Main interacting RNAs |
|
Moonlighting functions |
|
Localizations |
|
BulkPerturb-seq
|
|
Ensembl ID | MGP_AJ_G0031127 | Gene ID |
|
Accession |
- |
Symbol |
Mbd4 |
Alias |
- |
Full Name |
methyl-CpG binding domain protein 4 |
Status |
Confidence |
Length |
12675 bases |
Strand |
Minus strand |
Position |
6 : 113938296 - 113950970 |
RNA binding domain |
MBD |
Summary |
N.A. |
RNA binding domains (RBDs)
Protein |
Domain |
Pfam ID |
E-value |
Domain number |
MGP_AJ_P0079573 |
MBD |
PF01429 |
8.9e-20 |
1 |
MGP_AJ_P0079575 |
MBD |
PF01429 |
9.9e-20 |
1 |
MGP_AJ_P0079571 |
MBD |
PF01429 |
1.6e-19 |
1 |
RNA binding proteomes (RBPomes)
Pubmed ID |
Full Name |
Cell |
Author |
Time |
Doi |
Literatures on RNA binding capacity
Pubmed ID |
Title |
Author |
Time |
Journal |
Name |
Transcript ID |
bp |
Protein |
Translation ID |
Mbd4-001 |
MGP_AJ_T0079571 |
3614 |
554aa |
MGP_AJ_P0079571"/note="transcript_id=MGP_AJ_T0079571 |
- |
MGP_AJ_T0079572 |
2064 |
No protein |
- |
- |
MGP_AJ_T0079573 |
2924 |
365aa |
MGP_AJ_P0079573"/note="transcript_id=MGP_AJ_T0079573 |
- |
MGP_AJ_T0079574 |
669 |
175aa |
MGP_AJ_P0079574"/note="transcript_id=MGP_AJ_T0079574 |
- |
MGP_AJ_T0079575 |
2415 |
386aa |
MGP_AJ_P0079575"/note="transcript_id=MGP_AJ_T0079575 |
Pathway ID |
Pathway Name |
Source |
| | |
ensgID |
Trait |
pValue |
Pubmed ID |
ensgID | SNP | Chromosome | Position |
Trait | PubmedID | Or or BEAT |
EFO ID |
Protein-Protein Interaction (PPI)
Ensembl ID |
Source |
Target |
Species |
Protein ID |
Perc_pos |
Perc_id |
Species |
Protein ID |
Perc_pos |
Perc_id |
MGP_AJ_G0031127 | mus_musculus_aj | MGP_AJ_P0096597 | 37.9242 | 21.7565 | mus_musculus_aj | MGP_AJ_P0079571 | 34.296 | 19.6751 |
Ensembl ID |
Source |
Target |
Species |
Protein ID |
Perc_pos |
Perc_id |
Species |
Protein ID |
Perc_pos |
Perc_id |
MGP_AJ_G0031127 | mus_musculus_aj | MGP_AJ_P0079571 | 97.6534 | 96.7509 | mus_caroli | MGP_CAROLIEiJ_P0075599 | 95.922 | 95.0355 |
MGP_AJ_G0031127 | mus_musculus_aj | MGP_AJ_P0079571 | 99.0975 | 98.7365 | mus_musculus_cbaj | MGP_CBAJ_P0079099 | 99.0975 | 98.7365 |
MGP_AJ_G0031127 | mus_musculus_aj | MGP_AJ_P0079571 | 62.6354 | 59.5668 | mus_pahari | MGP_PahariEiJ_P0051798 | 86.9674 | 82.7068 |
MGP_AJ_G0031127 | mus_musculus_aj | MGP_AJ_P0079571 | 99.0975 | 98.7365 | mus_musculus_akrj | MGP_AKRJ_P0079494 | 99.0975 | 98.7365 |
MGP_AJ_G0031127 | mus_musculus_aj | MGP_AJ_P0079571 | 100 | 100 | mus_musculus | ENSMUSP00000032469 | 100 | 100 |
MGP_AJ_G0031127 | mus_musculus_aj | MGP_AJ_P0079571 | 100 | 100 | mus_musculus_c57bl6nj | MGP_C57BL6NJ_P0079989 | 100 | 100 |
MGP_AJ_G0031127 | mus_musculus_aj | MGP_AJ_P0079571 | 100 | 99.8195 | mus_musculus_129s1svimj | MGP_129S1SvImJ_P0079499 | 100 | 99.8195 |
MGP_AJ_G0031127 | mus_musculus_aj | MGP_AJ_P0079571 | 100 | 100 | mus_musculus_fvbnj | MGP_FVBNJ_P0079136 | 100 | 100 |
MGP_AJ_G0031127 | mus_musculus_aj | MGP_AJ_P0079571 | 100 | 99.8195 | mus_musculus_dba2j | MGP_DBA2J_P0079253 | 100 | 99.8195 |
MGP_AJ_G0031127 | mus_musculus_aj | MGP_AJ_P0079571 | 100 | 99.8195 | mus_musculus_lpj | MGP_LPJ_P0079283 | 100 | 99.8195 |
MGP_AJ_G0031127 | mus_musculus_aj | MGP_AJ_P0079571 | 99.0975 | 98.7365 | mus_musculus_c3hhej | MGP_C3HHeJ_P0077783 | 99.0975 | 98.7365 |
MGP_AJ_G0031127 | mus_musculus_aj | MGP_AJ_P0079571 | 98.0144 | 96.9314 | mus_spretus | MGP_SPRETEiJ_P0078670 | 98.1917 | 97.1067 |
MGP_AJ_G0031127 | mus_musculus_aj | MGP_AJ_P0079571 | 99.8195 | 99.8195 | mus_musculus_wsbeij | MGP_WSBEiJ_P0078244 | 99.8195 | 99.8195 |
MGP_AJ_G0031127 | mus_musculus_aj | MGP_AJ_P0079571 | 99.0975 | 98.7365 | mus_musculus_pwkphj | MGP_PWKPhJ_P0079151 | 99.0975 | 98.7365 |
MGP_AJ_G0031127 | mus_musculus_aj | MGP_AJ_P0079571 | 99.639 | 99.639 | mus_musculus_casteij | MGP_CASTEiJ_P0079725 | 99.639 | 99.639 |
MGP_AJ_G0031127 | mus_musculus_aj | MGP_AJ_P0079571 | 87.7256 | 83.3935 | rattus_norvegicus | ENSRNOP00000092006 | 82.3729 | 78.3051 |
MGP_AJ_G0031127 | mus_musculus_aj | MGP_AJ_P0079571 | 100 | 100 | mus_musculus_balbcj | MGP_BALBcJ_P0079513 | 100 | 100 |
MGP_AJ_G0031127 | mus_musculus_aj | MGP_AJ_P0079571 | 98.917 | 98.1949 | mus_spicilegus | ENSMSIP00000000791 | 98.917 | 98.1949 |
MGP_AJ_G0031127 | mus_musculus_aj | MGP_AJ_P0079571 | 100 | 99.8195 | mus_musculus_nzohlltj | MGP_NZOHlLtJ_P0080237 | 100 | 99.8195 |
MGP_AJ_G0031127 | mus_musculus_aj | MGP_AJ_P0079571 | 100 | 99.8195 | mus_musculus_nodshiltj | MGP_NODShiLtJ_P0079140 | 100 | 99.8195 |
Go ID |
Go term |
No. evidence |
Entries |
Species |
Category |