Description

Ensembl ID MGP_AJ_G0030112 Gene ID Accession -
Symbol Sbds Alias - Full Name Shwachman-Bodian-Diamond syndrome homolog (human)
Status Confidence Length 8188 bases Strand Minus strand
Position 5 : 128703378 - 128711565 RNA binding domain SBDS_domain_II , SBDS
Summary N.A.

RNA binding domains (RBDs)

Protein Domain Pfam ID E-value Domain number
MGP_AJ_P0074782 SBDS_domain_II PF09377 2.6e-18 1
MGP_AJ_P0074782 SBDS PF01172 4e-18 2
MGP_AJ_P0074780 SBDS_domain_II PF09377 5.4e-18 1
MGP_AJ_P0074780 SBDS PF01172 6.9e-32 2
MGP_AJ_P0074781 SBDS PF01172 2.9e-07 1

RNA binding proteomes (RBPomes)

Pubmed ID Full Name Cell Author Time Doi

Literatures on RNA binding capacity

Pubmed ID Title Author Time Journal

Transcripts

Name Transcript ID bp Protein Translation ID
Sbds-001 MGP_AJ_T0074780 1548 250aa MGP_AJ_P0074780"/note="transcript_id=MGP_AJ_T0074780
- MGP_AJ_T0074781 815 43aa MGP_AJ_P0074781"/note="transcript_id=MGP_AJ_T0074781
- MGP_AJ_T0074782 915 173aa MGP_AJ_P0074782"/note="transcript_id=MGP_AJ_T0074782
- MGP_AJ_T0074783 435 No protein -
- MGP_AJ_T0074784 360 No protein -

Pathways

Pathway ID Pathway Name Source

Phenotypes

ensgID Trait pValue Pubmed ID

GWAS

ensgIDSNPChromosomePosition TraitPubmedIDOr or BEAT EFO ID

Protein-Protein Interaction (PPI)

Paralogs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
MGP_AJ_G0030112

Orthologs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
MGP_AJ_G0030112mus_musculus_ajMGP_AJ_P007478010099.6mus_caroliMGP_CAROLIEiJ_P007111810099.6
MGP_AJ_G0030112mus_musculus_ajMGP_AJ_P0074780100100mus_musculus_cbajMGP_CBAJ_P0074299100100
MGP_AJ_G0030112mus_musculus_ajMGP_AJ_P007478010099.2mus_pahariMGP_PahariEiJ_P005938510099.2
MGP_AJ_G0030112mus_musculus_ajMGP_AJ_P0074780100100mus_musculus_akrjMGP_AKRJ_P0074678100100
MGP_AJ_G0030112mus_musculus_ajMGP_AJ_P0074780100100mus_musculusENSMUSP00000026387100100
MGP_AJ_G0030112mus_musculus_ajMGP_AJ_P0074780100100mus_musculus_c57bl6njMGP_C57BL6NJ_P0075191100100
MGP_AJ_G0030112mus_musculus_ajMGP_AJ_P0074780100100mus_musculus_129s1svimjMGP_129S1SvImJ_P0074697100100
MGP_AJ_G0030112mus_musculus_ajMGP_AJ_P0074780100100mus_musculus_fvbnjMGP_FVBNJ_P0074346100100
MGP_AJ_G0030112mus_musculus_ajMGP_AJ_P0074780100100mus_musculus_dba2jMGP_DBA2J_P0074442100100
MGP_AJ_G0030112mus_musculus_ajMGP_AJ_P0074780100100mus_musculus_lpjMGP_LPJ_P0074499100100
MGP_AJ_G0030112mus_musculus_ajMGP_AJ_P0074780100100mus_musculus_c3hhejMGP_C3HHeJ_P0074351100100
MGP_AJ_G0030112mus_musculus_ajMGP_AJ_P0074780100100mus_spretusMGP_SPRETEiJ_P0073832100100
MGP_AJ_G0030112mus_musculus_ajMGP_AJ_P0074780100100mus_musculus_wsbeijMGP_WSBEiJ_P0073475100100
MGP_AJ_G0030112mus_musculus_ajMGP_AJ_P0074780100100mus_musculus_pwkphjMGP_PWKPhJ_P0074354100100
MGP_AJ_G0030112mus_musculus_ajMGP_AJ_P0074780100100mus_musculus_casteijMGP_CASTEiJ_P0074897100100
MGP_AJ_G0030112mus_musculus_ajMGP_AJ_P007478010099.2rattus_norvegicusENSRNOP0000009396210099.2
MGP_AJ_G0030112mus_musculus_ajMGP_AJ_P0074780100100mus_musculus_balbcjMGP_BALBcJ_P0074718100100
MGP_AJ_G0030112mus_musculus_ajMGP_AJ_P007478082.881.6mus_spicilegusENSMSIP0000000640489.610488.3117
MGP_AJ_G0030112mus_musculus_ajMGP_AJ_P0074780100100mus_musculus_nzohlltjMGP_NZOHlLtJ_P0075422100100
MGP_AJ_G0030112mus_musculus_ajMGP_AJ_P0074780100100mus_musculus_nodshiltjMGP_NODShiLtJ_P0074347100100

Gene Ontology

Go ID Go term No. evidence Entries Species Category

Expression