RBPWorld - a comprehensive database of RNA Binding Proteins

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Description

Ensembl ID	MGP_AJ_G0024735	Gene ID		Accession	-
Symbol	Trmt112	Alias	-	Full Name	tRNA methyltransferase 11-2
Status	Confidence	Length	1252 bases	Strand	Plus strand
Position	19 : 3670373 - 3671624	RNA binding domain	Trm112p
Summary	N.A.

RNA binding domains (RBDs)

Search:

Protein	Domain	Pfam ID	E-value	Domain number
MGP_AJ_P0050835	Trm112p	PF03966	5.4e-17	1
MGP_AJ_P0050836	Trm112p	PF03966	3.4e-07	1

Showing 1 to 2 of 2 entries

Transcripts

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Search:

Name	Transcript ID	bp	Protein	Translation ID
-	MGP_AJ_T0050835	985	125aa	MGP_AJ_P0050835"/note="transcript_id=MGP_AJ_T0050835
-	MGP_AJ_T0050836	646	108aa	MGP_AJ_P0050836"/note="transcript_id=MGP_AJ_T0050836
Trmt112-001	MGP_AJ_T0050834	922	113aa	MGP_AJ_P0050834"/note="transcript_id=MGP_AJ_T0050834

Showing 1 to 3 of 3 entries

Gene Model

Click here to download MGP_AJ_G0024735's gene model file

Protein-Protein Interaction (PPI)

Click here to download MGP_AJ_G0024735's PPI file

Orthologs

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Search:

Ensembl ID	Source				Target
Ensembl ID	Species	Protein ID	Perc_pos	Perc_id	Species	Protein ID	Perc_pos	Perc_id
MGP_AJ_G0024735	mus_musculus_aj	MGP_AJ_P0050835	100	100	mus_caroli	MGP_CAROLIEiJ_P0047895	100	100
MGP_AJ_G0024735	mus_musculus_aj	MGP_AJ_P0050835	100	100	mus_musculus_cbaj	MGP_CBAJ_P0050462	100	100
MGP_AJ_G0024735	mus_musculus_aj	MGP_AJ_P0050835	100	100	mus_pahari	MGP_PahariEiJ_P0020899	100	100
MGP_AJ_G0024735	mus_musculus_aj	MGP_AJ_P0050835	100	100	mus_musculus_akrj	MGP_AKRJ_P0050790	100	100
MGP_AJ_G0024735	mus_musculus_aj	MGP_AJ_P0050835	100	100	mus_musculus	ENSMUSP00000112250	100	100
MGP_AJ_G0024735	mus_musculus_aj	MGP_AJ_P0050835	92	89.6	mus_musculus_c57bl6nj	MGP_C57BL6NJ_P0051278	55.5556	54.1063
MGP_AJ_G0024735	mus_musculus_aj	MGP_AJ_P0050835	100	100	mus_musculus_129s1svimj	MGP_129S1SvImJ_P0050854	100	100
MGP_AJ_G0024735	mus_musculus_aj	MGP_AJ_P0050835	99.2	99.2	mus_musculus_fvbnj	MGP_FVBNJ_P0050524	100	100
MGP_AJ_G0024735	mus_musculus_aj	MGP_AJ_P0050835	100	100	mus_musculus_dba2j	MGP_DBA2J_P0050558	100	100
MGP_AJ_G0024735	mus_musculus_aj	MGP_AJ_P0050835	96.8	96.8	mus_musculus_lpj	MGP_LPJ_P0050682	96.8	96.8

Showing 1 to 10 of 20 entries

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Contents

Description
RBDs
Transcripts
Gene Model
PPI
Orthologs