Description

Ensembl ID MGP_AJ_G0021743 Gene ID Accession -
Symbol Pop1 Alias - Full Name processing of precursor 1, ribonuclease P/MRP family, (S. cerevisiae)
Status Confidence Length 33847 bases Strand Plus strand
Position 15 : 31558255 - 31592101 RNA binding domain POPLD , POP1
Summary N.A.

RNA binding domains (RBDs)

Protein Domain Pfam ID E-value Domain number
MGP_AJ_P0040734 POPLD PF08170 7.6e-26 1
MGP_AJ_P0040734 POP1 PF06978 7.7e-39 2
MGP_AJ_P0040734 POP1 PF06978 7.7e-39 3
MGP_AJ_P0040733 POPLD PF08170 7.9e-26 1
MGP_AJ_P0040733 POP1 PF06978 8.5e-39 2
MGP_AJ_P0040733 POP1 PF06978 8.5e-39 3

RNA binding proteomes (RBPomes)

Pubmed ID Full Name Cell Author Time Doi

Literatures on RNA binding capacity

Pubmed ID Title Author Time Journal

Transcripts

Name Transcript ID bp Protein Translation ID
Pop1-001 MGP_AJ_T0040733 3395 1045aa MGP_AJ_P0040733"/note="transcript_id=MGP_AJ_T0040733
- MGP_AJ_T0040734 3275 1015aa MGP_AJ_P0040734"/note="transcript_id=MGP_AJ_T0040734
- MGP_AJ_T0040735 392 No protein -
- MGP_AJ_T0040736 470 No protein -
- MGP_AJ_T0040737 794 No protein -
- MGP_AJ_T0040738 522 No protein -

Pathways

Pathway ID Pathway Name Source

Phenotypes

ensgID Trait pValue Pubmed ID

GWAS

ensgIDSNPChromosomePosition TraitPubmedIDOr or BEAT EFO ID

Protein-Protein Interaction (PPI)

Paralogs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
MGP_AJ_G0021743mus_musculus_ajMGP_AJ_P004541732.874618.1957mus_musculus_ajMGP_AJ_P004073320.574211.3876

Orthologs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
MGP_AJ_G0021743mus_musculus_ajMGP_AJ_P004073398.947497.6077mus_caroliMGP_CAROLIEiJ_P003803198.947497.6077
MGP_AJ_G0021743mus_musculus_ajMGP_AJ_P0040733100100mus_musculus_cbajMGP_CBAJ_P0040387100100
MGP_AJ_G0021743mus_musculus_ajMGP_AJ_P004073396.746494.5455mus_pahariMGP_PahariEiJ_P004141797.118294.9087
MGP_AJ_G0021743mus_musculus_ajMGP_AJ_P0040733100100mus_musculus_akrjMGP_AKRJ_P0040693100100
MGP_AJ_G0021743mus_musculus_ajMGP_AJ_P0040733100100mus_musculusENSMUSP00000052654100100
MGP_AJ_G0021743mus_musculus_ajMGP_AJ_P0040733100100mus_musculus_c57bl6njMGP_C57BL6NJ_P0041199100100
MGP_AJ_G0021743mus_musculus_ajMGP_AJ_P004073399.904399.7129mus_musculus_129s1svimjMGP_129S1SvImJ_P004077099.904399.7129
MGP_AJ_G0021743mus_musculus_ajMGP_AJ_P0040733100100mus_musculus_fvbnjMGP_FVBNJ_P0040501100100
MGP_AJ_G0021743mus_musculus_ajMGP_AJ_P0040733100100mus_musculus_dba2jMGP_DBA2J_P0040540100100
MGP_AJ_G0021743mus_musculus_ajMGP_AJ_P004073399.904399.7129mus_musculus_lpjMGP_LPJ_P004060399.904399.7129
MGP_AJ_G0021743mus_musculus_ajMGP_AJ_P0040733100100mus_musculus_c3hhejMGP_C3HHeJ_P0040469100100
MGP_AJ_G0021743mus_musculus_ajMGP_AJ_P004073398.660398.1818mus_spretusMGP_SPRETEiJ_P003981399.039498.5591
MGP_AJ_G0021743mus_musculus_ajMGP_AJ_P004073310099.9043mus_musculus_wsbeijMGP_WSBEiJ_P003987410099.9043
MGP_AJ_G0021743mus_musculus_ajMGP_AJ_P004073399.808699.4258mus_musculus_pwkphjMGP_PWKPhJ_P004011399.808699.4258
MGP_AJ_G0021743mus_musculus_ajMGP_AJ_P0040733100100mus_musculus_casteijMGP_CASTEiJ_P0040520100100
MGP_AJ_G0021743mus_musculus_ajMGP_AJ_P004073394.545591.1005rattus_norvegicusENSRNOP0000000719094.63691.1877
MGP_AJ_G0021743mus_musculus_ajMGP_AJ_P0040733100100mus_musculus_balbcjMGP_BALBcJ_P0040732100100
MGP_AJ_G0021743mus_musculus_ajMGP_AJ_P004073396.842196.3636mus_spicilegusENSMSIP0000001931696.472895.9962
MGP_AJ_G0021743mus_musculus_ajMGP_AJ_P0040733100100mus_musculus_nzohlltjMGP_NZOHlLtJ_P0041247100100
MGP_AJ_G0021743mus_musculus_ajMGP_AJ_P004073399.904399.7129mus_musculus_nodshiltjMGP_NODShiLtJ_P004048999.904399.7129

Gene Ontology

Go ID Go term No. evidence Entries Species Category

Expression