RBP Type |
N.A. |
Diseases |
|
Drug |
|
Main interacting RNAs |
|
Moonlighting functions |
|
Localizations |
|
BulkPerturb-seq
|
|
Ensembl ID | MGP_AJ_G0021743 | Gene ID |
|
Accession |
- |
Symbol |
Pop1 |
Alias |
- |
Full Name |
processing of precursor 1, ribonuclease P/MRP family, (S. cerevisiae) |
Status |
Confidence |
Length |
33847 bases |
Strand |
Plus strand |
Position |
15 : 31558255 - 31592101 |
RNA binding domain |
POPLD , POP1 |
Summary |
N.A. |
RNA binding domains (RBDs)
Protein |
Domain |
Pfam ID |
E-value |
Domain number |
MGP_AJ_P0040734 |
POPLD |
PF08170 |
7.6e-26 |
1 |
MGP_AJ_P0040734 |
POP1 |
PF06978 |
7.7e-39 |
2 |
MGP_AJ_P0040734 |
POP1 |
PF06978 |
7.7e-39 |
3 |
MGP_AJ_P0040733 |
POPLD |
PF08170 |
7.9e-26 |
1 |
MGP_AJ_P0040733 |
POP1 |
PF06978 |
8.5e-39 |
2 |
MGP_AJ_P0040733 |
POP1 |
PF06978 |
8.5e-39 |
3 |
RNA binding proteomes (RBPomes)
Pubmed ID |
Full Name |
Cell |
Author |
Time |
Doi |
Literatures on RNA binding capacity
Pubmed ID |
Title |
Author |
Time |
Journal |
Name |
Transcript ID |
bp |
Protein |
Translation ID |
Pop1-001 |
MGP_AJ_T0040733 |
3395 |
1045aa |
MGP_AJ_P0040733"/note="transcript_id=MGP_AJ_T0040733 |
- |
MGP_AJ_T0040734 |
3275 |
1015aa |
MGP_AJ_P0040734"/note="transcript_id=MGP_AJ_T0040734 |
- |
MGP_AJ_T0040735 |
392 |
No protein |
- |
- |
MGP_AJ_T0040736 |
470 |
No protein |
- |
- |
MGP_AJ_T0040737 |
794 |
No protein |
- |
- |
MGP_AJ_T0040738 |
522 |
No protein |
- |
Pathway ID |
Pathway Name |
Source |
| | |
ensgID |
Trait |
pValue |
Pubmed ID |
ensgID | SNP | Chromosome | Position |
Trait | PubmedID | Or or BEAT |
EFO ID |
Protein-Protein Interaction (PPI)
Ensembl ID |
Source |
Target |
Species |
Protein ID |
Perc_pos |
Perc_id |
Species |
Protein ID |
Perc_pos |
Perc_id |
MGP_AJ_G0021743 | mus_musculus_aj | MGP_AJ_P0045417 | 32.8746 | 18.1957 | mus_musculus_aj | MGP_AJ_P0040733 | 20.5742 | 11.3876 |
Ensembl ID |
Source |
Target |
Species |
Protein ID |
Perc_pos |
Perc_id |
Species |
Protein ID |
Perc_pos |
Perc_id |
MGP_AJ_G0021743 | mus_musculus_aj | MGP_AJ_P0040733 | 98.9474 | 97.6077 | mus_caroli | MGP_CAROLIEiJ_P0038031 | 98.9474 | 97.6077 |
MGP_AJ_G0021743 | mus_musculus_aj | MGP_AJ_P0040733 | 100 | 100 | mus_musculus_cbaj | MGP_CBAJ_P0040387 | 100 | 100 |
MGP_AJ_G0021743 | mus_musculus_aj | MGP_AJ_P0040733 | 96.7464 | 94.5455 | mus_pahari | MGP_PahariEiJ_P0041417 | 97.1182 | 94.9087 |
MGP_AJ_G0021743 | mus_musculus_aj | MGP_AJ_P0040733 | 100 | 100 | mus_musculus_akrj | MGP_AKRJ_P0040693 | 100 | 100 |
MGP_AJ_G0021743 | mus_musculus_aj | MGP_AJ_P0040733 | 100 | 100 | mus_musculus | ENSMUSP00000052654 | 100 | 100 |
MGP_AJ_G0021743 | mus_musculus_aj | MGP_AJ_P0040733 | 100 | 100 | mus_musculus_c57bl6nj | MGP_C57BL6NJ_P0041199 | 100 | 100 |
MGP_AJ_G0021743 | mus_musculus_aj | MGP_AJ_P0040733 | 99.9043 | 99.7129 | mus_musculus_129s1svimj | MGP_129S1SvImJ_P0040770 | 99.9043 | 99.7129 |
MGP_AJ_G0021743 | mus_musculus_aj | MGP_AJ_P0040733 | 100 | 100 | mus_musculus_fvbnj | MGP_FVBNJ_P0040501 | 100 | 100 |
MGP_AJ_G0021743 | mus_musculus_aj | MGP_AJ_P0040733 | 100 | 100 | mus_musculus_dba2j | MGP_DBA2J_P0040540 | 100 | 100 |
MGP_AJ_G0021743 | mus_musculus_aj | MGP_AJ_P0040733 | 99.9043 | 99.7129 | mus_musculus_lpj | MGP_LPJ_P0040603 | 99.9043 | 99.7129 |
MGP_AJ_G0021743 | mus_musculus_aj | MGP_AJ_P0040733 | 100 | 100 | mus_musculus_c3hhej | MGP_C3HHeJ_P0040469 | 100 | 100 |
MGP_AJ_G0021743 | mus_musculus_aj | MGP_AJ_P0040733 | 98.6603 | 98.1818 | mus_spretus | MGP_SPRETEiJ_P0039813 | 99.0394 | 98.5591 |
MGP_AJ_G0021743 | mus_musculus_aj | MGP_AJ_P0040733 | 100 | 99.9043 | mus_musculus_wsbeij | MGP_WSBEiJ_P0039874 | 100 | 99.9043 |
MGP_AJ_G0021743 | mus_musculus_aj | MGP_AJ_P0040733 | 99.8086 | 99.4258 | mus_musculus_pwkphj | MGP_PWKPhJ_P0040113 | 99.8086 | 99.4258 |
MGP_AJ_G0021743 | mus_musculus_aj | MGP_AJ_P0040733 | 100 | 100 | mus_musculus_casteij | MGP_CASTEiJ_P0040520 | 100 | 100 |
MGP_AJ_G0021743 | mus_musculus_aj | MGP_AJ_P0040733 | 94.5455 | 91.1005 | rattus_norvegicus | ENSRNOP00000007190 | 94.636 | 91.1877 |
MGP_AJ_G0021743 | mus_musculus_aj | MGP_AJ_P0040733 | 100 | 100 | mus_musculus_balbcj | MGP_BALBcJ_P0040732 | 100 | 100 |
MGP_AJ_G0021743 | mus_musculus_aj | MGP_AJ_P0040733 | 96.8421 | 96.3636 | mus_spicilegus | ENSMSIP00000019316 | 96.4728 | 95.9962 |
MGP_AJ_G0021743 | mus_musculus_aj | MGP_AJ_P0040733 | 100 | 100 | mus_musculus_nzohlltj | MGP_NZOHlLtJ_P0041247 | 100 | 100 |
MGP_AJ_G0021743 | mus_musculus_aj | MGP_AJ_P0040733 | 99.9043 | 99.7129 | mus_musculus_nodshiltj | MGP_NODShiLtJ_P0040489 | 99.9043 | 99.7129 |
Go ID |
Go term |
No. evidence |
Entries |
Species |
Category |