Description

Ensembl ID MGP_AJ_G0021566 Gene ID Accession -
Symbol Tdrd3 Alias - Full Name tudor domain containing 3
Status Confidence Length 128941 bases Strand Plus strand
Position 14 : 80715125 - 80844065 RNA binding domain TUDOR , SMN
Summary N.A.

RNA binding domains (RBDs)

Protein Domain Pfam ID E-value Domain number
MGP_AJ_P0040201 TUDOR PF00567 1.9e-08 1
MGP_AJ_P0040201 SMN PF06003 4.8e-09 2
MGP_AJ_P0040200 TUDOR PF00567 1.9e-08 1
MGP_AJ_P0040200 SMN PF06003 4.8e-09 2
MGP_AJ_P0040199 TUDOR PF00567 2e-08 1
MGP_AJ_P0040199 SMN PF06003 1.5e-08 2

RNA binding proteomes (RBPomes)

Pubmed ID Full Name Cell Author Time Doi

Literatures on RNA binding capacity

Pubmed ID Title Author Time Journal

Transcripts

Name Transcript ID bp Protein Translation ID
Tdrd3-001 MGP_AJ_T0040199 5283 716aa MGP_AJ_P0040199"/note="transcript_id=MGP_AJ_T0040199
- MGP_AJ_T0040200 2516 743aa MGP_AJ_P0040200"/note="transcript_id=MGP_AJ_T0040200
- MGP_AJ_T0040201 2533 737aa MGP_AJ_P0040201"/note="transcript_id=MGP_AJ_T0040201
- MGP_AJ_T0040202 636 211aa MGP_AJ_P0040202"/note="transcript_id=MGP_AJ_T0040202
- MGP_AJ_T0040203 849 242aa MGP_AJ_P0040203"/note="transcript_id=MGP_AJ_T0040203

Pathways

Pathway ID Pathway Name Source

Phenotypes

ensgID Trait pValue Pubmed ID

GWAS

ensgIDSNPChromosomePosition TraitPubmedIDOr or BEAT EFO ID

Protein-Protein Interaction (PPI)

Paralogs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
MGP_AJ_G0021566

Orthologs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
MGP_AJ_G0021566mus_musculus_ajMGP_AJ_P004020098.250396.9044mus_caroliMGP_CAROLIEiJ_P003750298.118396.7742
MGP_AJ_G0021566mus_musculus_ajMGP_AJ_P0040200100100mus_musculus_cbajMGP_CBAJ_P0039854100100
MGP_AJ_G0021566mus_musculus_ajMGP_AJ_P004020098.250396.5007mus_pahariMGP_PahariEiJ_P008558698.118396.371
MGP_AJ_G0021566mus_musculus_ajMGP_AJ_P004020099.865499.8654mus_musculus_akrjMGP_AKRJ_P004015699.865499.8654
MGP_AJ_G0021566mus_musculus_ajMGP_AJ_P004020099.596299.327mus_musculusENSMUSP0000012901999.596299.327
MGP_AJ_G0021566mus_musculus_ajMGP_AJ_P004020099.596299.327mus_musculus_c57bl6njMGP_C57BL6NJ_P004067499.596299.327
MGP_AJ_G0021566mus_musculus_ajMGP_AJ_P004020099.596299.327mus_musculus_129s1svimjMGP_129S1SvImJ_P004023599.596299.327
MGP_AJ_G0021566mus_musculus_ajMGP_AJ_P0040200100100mus_musculus_fvbnjMGP_FVBNJ_P0039964100100
MGP_AJ_G0021566mus_musculus_ajMGP_AJ_P004020099.865499.8654mus_musculus_dba2jMGP_DBA2J_P004000699.865499.8654
MGP_AJ_G0021566mus_musculus_ajMGP_AJ_P004020099.596299.327mus_musculus_lpjMGP_LPJ_P004007699.596299.327
MGP_AJ_G0021566mus_musculus_ajMGP_AJ_P0040200100100mus_musculus_c3hhejMGP_C3HHeJ_P0039937100100
MGP_AJ_G0021566mus_musculus_ajMGP_AJ_P004020099.461698.9233mus_spretusMGP_SPRETEiJ_P003924499.461698.9233
MGP_AJ_G0021566mus_musculus_ajMGP_AJ_P004020099.865499.8654mus_musculus_wsbeijMGP_WSBEiJ_P003933299.865499.8654
MGP_AJ_G0021566mus_musculus_ajMGP_AJ_P004020099.596299.327mus_musculus_pwkphjMGP_PWKPhJ_P003955599.596299.327
MGP_AJ_G0021566mus_musculus_ajMGP_AJ_P004020098.923398.7887mus_musculus_casteijMGP_CASTEiJ_P003995698.923398.7887
MGP_AJ_G0021566mus_musculus_ajMGP_AJ_P004020092.46388.5599rattus_norvegicusENSRNOP0000008650093.852589.8907
MGP_AJ_G0021566mus_musculus_ajMGP_AJ_P0040200100100mus_musculus_balbcjMGP_BALBcJ_P0040198100100
MGP_AJ_G0021566mus_musculus_ajMGP_AJ_P004020098.788797.9812mus_spicilegusENSMSIP0000001583998.788797.9812
MGP_AJ_G0021566mus_musculus_ajMGP_AJ_P004020099.865499.8654mus_musculus_nzohlltjMGP_NZOHlLtJ_P004071199.865499.8654
MGP_AJ_G0021566mus_musculus_ajMGP_AJ_P0040200100100mus_musculus_nodshiltjMGP_NODShiLtJ_P0039962100100

Gene Ontology

Go ID Go term No. evidence Entries Species Category

Expression