RBP Type |
N.A. |
Diseases |
|
Drug |
|
Main interacting RNAs |
|
Moonlighting functions |
|
Localizations |
|
BulkPerturb-seq
|
|
Ensembl ID | MGP_AJ_G0021566 | Gene ID |
|
Accession |
- |
Symbol |
Tdrd3 |
Alias |
- |
Full Name |
tudor domain containing 3 |
Status |
Confidence |
Length |
128941 bases |
Strand |
Plus strand |
Position |
14 : 80715125 - 80844065 |
RNA binding domain |
TUDOR , SMN |
Summary |
N.A. |
RNA binding domains (RBDs)
Protein |
Domain |
Pfam ID |
E-value |
Domain number |
MGP_AJ_P0040201 |
TUDOR |
PF00567 |
1.9e-08 |
1 |
MGP_AJ_P0040201 |
SMN |
PF06003 |
4.8e-09 |
2 |
MGP_AJ_P0040200 |
TUDOR |
PF00567 |
1.9e-08 |
1 |
MGP_AJ_P0040200 |
SMN |
PF06003 |
4.8e-09 |
2 |
MGP_AJ_P0040199 |
TUDOR |
PF00567 |
2e-08 |
1 |
MGP_AJ_P0040199 |
SMN |
PF06003 |
1.5e-08 |
2 |
RNA binding proteomes (RBPomes)
Pubmed ID |
Full Name |
Cell |
Author |
Time |
Doi |
Literatures on RNA binding capacity
Pubmed ID |
Title |
Author |
Time |
Journal |
Name |
Transcript ID |
bp |
Protein |
Translation ID |
Tdrd3-001 |
MGP_AJ_T0040199 |
5283 |
716aa |
MGP_AJ_P0040199"/note="transcript_id=MGP_AJ_T0040199 |
- |
MGP_AJ_T0040200 |
2516 |
743aa |
MGP_AJ_P0040200"/note="transcript_id=MGP_AJ_T0040200 |
- |
MGP_AJ_T0040201 |
2533 |
737aa |
MGP_AJ_P0040201"/note="transcript_id=MGP_AJ_T0040201 |
- |
MGP_AJ_T0040202 |
636 |
211aa |
MGP_AJ_P0040202"/note="transcript_id=MGP_AJ_T0040202 |
- |
MGP_AJ_T0040203 |
849 |
242aa |
MGP_AJ_P0040203"/note="transcript_id=MGP_AJ_T0040203 |
Pathway ID |
Pathway Name |
Source |
| | |
ensgID |
Trait |
pValue |
Pubmed ID |
ensgID | SNP | Chromosome | Position |
Trait | PubmedID | Or or BEAT |
EFO ID |
Protein-Protein Interaction (PPI)
Ensembl ID |
Source |
Target |
Species |
Protein ID |
Perc_pos |
Perc_id |
Species |
Protein ID |
Perc_pos |
Perc_id |
MGP_AJ_G0021566 | | | | | | | | |
Ensembl ID |
Source |
Target |
Species |
Protein ID |
Perc_pos |
Perc_id |
Species |
Protein ID |
Perc_pos |
Perc_id |
MGP_AJ_G0021566 | mus_musculus_aj | MGP_AJ_P0040200 | 98.2503 | 96.9044 | mus_caroli | MGP_CAROLIEiJ_P0037502 | 98.1183 | 96.7742 |
MGP_AJ_G0021566 | mus_musculus_aj | MGP_AJ_P0040200 | 100 | 100 | mus_musculus_cbaj | MGP_CBAJ_P0039854 | 100 | 100 |
MGP_AJ_G0021566 | mus_musculus_aj | MGP_AJ_P0040200 | 98.2503 | 96.5007 | mus_pahari | MGP_PahariEiJ_P0085586 | 98.1183 | 96.371 |
MGP_AJ_G0021566 | mus_musculus_aj | MGP_AJ_P0040200 | 99.8654 | 99.8654 | mus_musculus_akrj | MGP_AKRJ_P0040156 | 99.8654 | 99.8654 |
MGP_AJ_G0021566 | mus_musculus_aj | MGP_AJ_P0040200 | 99.5962 | 99.327 | mus_musculus | ENSMUSP00000129019 | 99.5962 | 99.327 |
MGP_AJ_G0021566 | mus_musculus_aj | MGP_AJ_P0040200 | 99.5962 | 99.327 | mus_musculus_c57bl6nj | MGP_C57BL6NJ_P0040674 | 99.5962 | 99.327 |
MGP_AJ_G0021566 | mus_musculus_aj | MGP_AJ_P0040200 | 99.5962 | 99.327 | mus_musculus_129s1svimj | MGP_129S1SvImJ_P0040235 | 99.5962 | 99.327 |
MGP_AJ_G0021566 | mus_musculus_aj | MGP_AJ_P0040200 | 100 | 100 | mus_musculus_fvbnj | MGP_FVBNJ_P0039964 | 100 | 100 |
MGP_AJ_G0021566 | mus_musculus_aj | MGP_AJ_P0040200 | 99.8654 | 99.8654 | mus_musculus_dba2j | MGP_DBA2J_P0040006 | 99.8654 | 99.8654 |
MGP_AJ_G0021566 | mus_musculus_aj | MGP_AJ_P0040200 | 99.5962 | 99.327 | mus_musculus_lpj | MGP_LPJ_P0040076 | 99.5962 | 99.327 |
MGP_AJ_G0021566 | mus_musculus_aj | MGP_AJ_P0040200 | 100 | 100 | mus_musculus_c3hhej | MGP_C3HHeJ_P0039937 | 100 | 100 |
MGP_AJ_G0021566 | mus_musculus_aj | MGP_AJ_P0040200 | 99.4616 | 98.9233 | mus_spretus | MGP_SPRETEiJ_P0039244 | 99.4616 | 98.9233 |
MGP_AJ_G0021566 | mus_musculus_aj | MGP_AJ_P0040200 | 99.8654 | 99.8654 | mus_musculus_wsbeij | MGP_WSBEiJ_P0039332 | 99.8654 | 99.8654 |
MGP_AJ_G0021566 | mus_musculus_aj | MGP_AJ_P0040200 | 99.5962 | 99.327 | mus_musculus_pwkphj | MGP_PWKPhJ_P0039555 | 99.5962 | 99.327 |
MGP_AJ_G0021566 | mus_musculus_aj | MGP_AJ_P0040200 | 98.9233 | 98.7887 | mus_musculus_casteij | MGP_CASTEiJ_P0039956 | 98.9233 | 98.7887 |
MGP_AJ_G0021566 | mus_musculus_aj | MGP_AJ_P0040200 | 92.463 | 88.5599 | rattus_norvegicus | ENSRNOP00000086500 | 93.8525 | 89.8907 |
MGP_AJ_G0021566 | mus_musculus_aj | MGP_AJ_P0040200 | 100 | 100 | mus_musculus_balbcj | MGP_BALBcJ_P0040198 | 100 | 100 |
MGP_AJ_G0021566 | mus_musculus_aj | MGP_AJ_P0040200 | 98.7887 | 97.9812 | mus_spicilegus | ENSMSIP00000015839 | 98.7887 | 97.9812 |
MGP_AJ_G0021566 | mus_musculus_aj | MGP_AJ_P0040200 | 99.8654 | 99.8654 | mus_musculus_nzohlltj | MGP_NZOHlLtJ_P0040711 | 99.8654 | 99.8654 |
MGP_AJ_G0021566 | mus_musculus_aj | MGP_AJ_P0040200 | 100 | 100 | mus_musculus_nodshiltj | MGP_NODShiLtJ_P0039962 | 100 | 100 |
Go ID |
Go term |
No. evidence |
Entries |
Species |
Category |