RBPWorld - a comprehensive database of RNA Binding Proteins

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Description

Ensembl ID	MGP_AJ_G0019009	Gene ID		Accession	-
Symbol	Rpl23	Alias	-	Full Name	ribosomal protein L23
Status	Confidence	Length	6050 bases	Strand	Minus strand
Position	11 : 96104936 - 96110985	RNA binding domain	Ribosomal_L14
Summary	N.A.

RNA binding domains (RBDs)

Search:

Protein	Domain	Pfam ID	E-value	Domain number
MGP_AJ_P0031992	Ribosomal_L14	PF00238	8.5e-36	1

Showing 1 to 1 of 1 entries

Transcripts

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Search:

Name	Transcript ID	bp	Protein	Translation ID
-	MGP_AJ_T0031993	728	No protein	-
-	MGP_AJ_T0031994	480	No protein	-
-	MGP_AJ_T0031995	658	No protein	-
-	MGP_AJ_T0031996	334	60aa	MGP_AJ_P0031996"/note="transcript_id=MGP_AJ_T0031996
Rpl23-001	MGP_AJ_T0031992	1059	140aa	MGP_AJ_P0031992"/note="transcript_id=MGP_AJ_T0031992

Showing 1 to 5 of 5 entries

Gene Model

Click here to download MGP_AJ_G0019009's gene model file

Protein-Protein Interaction (PPI)

Click here to download MGP_AJ_G0019009's PPI file

Orthologs

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Search:

Ensembl ID	Source				Target
Ensembl ID	Species	Protein ID	Perc_pos	Perc_id	Species	Protein ID	Perc_pos	Perc_id
MGP_AJ_G0019009	mus_musculus_aj	MGP_AJ_P0031992	100	100	mus_musculus_cbaj	MGP_CBAJ_P0031693	100	100
MGP_AJ_G0019009	mus_musculus_aj	MGP_AJ_P0031992	100	100	mus_musculus_akrj	MGP_AKRJ_P0031973	100	100
MGP_AJ_G0019009	mus_musculus_aj	MGP_AJ_P0031992	100	100	mus_musculus	ENSMUSP00000099435	100	100
MGP_AJ_G0019009	mus_musculus_aj	MGP_AJ_P0031992	100	100	mus_musculus_c57bl6nj	MGP_C57BL6NJ_P0032500	100	100
MGP_AJ_G0019009	mus_musculus_aj	MGP_AJ_P0031992	100	100	mus_musculus_129s1svimj	MGP_129S1SvImJ_P0032052	100	100
MGP_AJ_G0019009	mus_musculus_aj	MGP_AJ_P0031992	100	100	mus_musculus_fvbnj	MGP_FVBNJ_P0031824	100	100
MGP_AJ_G0019009	mus_musculus_aj	MGP_AJ_P0031992	100	100	mus_musculus_dba2j	MGP_DBA2J_P0031835	100	100
MGP_AJ_G0019009	mus_musculus_aj	MGP_AJ_P0031992	100	100	mus_musculus_c3hhej	MGP_C3HHeJ_P0031780	100	100
MGP_AJ_G0019009	mus_musculus_aj	MGP_AJ_P0031992	100	100	mus_musculus_wsbeij	MGP_WSBEiJ_P0031261	100	100
MGP_AJ_G0019009	mus_musculus_aj	MGP_AJ_P0031992	77.8571	77.1429	mus_musculus_pwkphj	MGP_PWKPhJ_P0031292	89.3443	88.5246

Showing 1 to 10 of 17 entries

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Contents

Description
RBDs
Transcripts
Gene Model
PPI
Orthologs