Description

Ensembl ID MGP_AJ_G0018667 Gene ID Accession -
Symbol Tsr1 Alias - Full Name TSR1 20S rRNA accumulation
Status Confidence Length 11282 bases Strand Plus strand
Position 11 : 72806836 - 72818117 RNA binding domain AARP2CN
Summary N.A.

RNA binding domains (RBDs)

Protein Domain Pfam ID E-value Domain number
MGP_AJ_P0030597 AARP2CN PF08142 3.2e-20 1

RNA binding proteomes (RBPomes)

Pubmed ID Full Name Cell Author Time Doi

Literatures on RNA binding capacity

Pubmed ID Title Author Time Journal

Transcripts

Name Transcript ID bp Protein Translation ID
Tsr1-001 MGP_AJ_T0030596 1549 65aa MGP_AJ_P0030596"/note="transcript_id=MGP_AJ_T0030596
- MGP_AJ_T0030597 3389 803aa MGP_AJ_P0030597"/note="transcript_id=MGP_AJ_T0030597
- MGP_AJ_T0030598 1369 No protein -
- MGP_AJ_T0030599 2336 90aa MGP_AJ_P0030599"/note="transcript_id=MGP_AJ_T0030599
- MGP_AJ_T0030600 541 No protein -
- MGP_AJ_T0030601 708 40aa MGP_AJ_P0030601"/note="transcript_id=MGP_AJ_T0030601
- MGP_AJ_T0030602 769 No protein -

Pathways

Pathway ID Pathway Name Source

Phenotypes

ensgID Trait pValue Pubmed ID

GWAS

ensgIDSNPChromosomePosition TraitPubmedIDOr or BEAT EFO ID

Protein-Protein Interaction (PPI)

Paralogs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
MGP_AJ_G0018667mus_musculus_ajMGP_AJ_P007971328.660416.9003mus_musculus_ajMGP_AJ_P003059745.828127.0237

Orthologs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
MGP_AJ_G0018667mus_musculus_ajMGP_AJ_P003059798.381197.8829mus_caroliMGP_CAROLIEiJ_P002819798.381197.8829
MGP_AJ_G0018667mus_musculus_ajMGP_AJ_P0030597100100mus_musculus_cbajMGP_CBAJ_P0030298100100
MGP_AJ_G0018667mus_musculus_ajMGP_AJ_P003059798.879297.7584mus_pahariMGP_PahariEiJ_P003493898.879297.7584
MGP_AJ_G0018667mus_musculus_ajMGP_AJ_P0030597100100mus_musculus_akrjMGP_AKRJ_P0030578100100
MGP_AJ_G0018667mus_musculus_ajMGP_AJ_P0030597100100mus_musculusENSMUSP00000039027100100
MGP_AJ_G0018667mus_musculus_ajMGP_AJ_P0030597100100mus_musculus_c57bl6njMGP_C57BL6NJ_P0031099100100
MGP_AJ_G0018667mus_musculus_ajMGP_AJ_P0030597100100mus_musculus_129s1svimjMGP_129S1SvImJ_P0030660100100
MGP_AJ_G0018667mus_musculus_ajMGP_AJ_P0030597100100mus_musculus_fvbnjMGP_FVBNJ_P0030434100100
MGP_AJ_G0018667mus_musculus_ajMGP_AJ_P0030597100100mus_musculus_dba2jMGP_DBA2J_P0030434100100
MGP_AJ_G0018667mus_musculus_ajMGP_AJ_P0030597100100mus_musculus_lpjMGP_LPJ_P0030559100100
MGP_AJ_G0018667mus_musculus_ajMGP_AJ_P0030597100100mus_musculus_c3hhejMGP_C3HHeJ_P0030385100100
MGP_AJ_G0018667mus_musculus_ajMGP_AJ_P003059799.626499.3773mus_spretusMGP_SPRETEiJ_P002958899.626499.3773
MGP_AJ_G0018667mus_musculus_ajMGP_AJ_P003059710.958910.5853mus_musculus_wsbeijMGP_WSBEiJ_P002987097.777894.4444
MGP_AJ_G0018667mus_musculus_ajMGP_AJ_P003059710.958910.5853mus_musculus_pwkphjMGP_PWKPhJ_P002981797.777894.4444
MGP_AJ_G0018667mus_musculus_ajMGP_AJ_P003059710.958910.5853mus_musculus_casteijMGP_CASTEiJ_P003010097.777894.4444
MGP_AJ_G0018667mus_musculus_ajMGP_AJ_P003059796.886794.5205rattus_norvegicusENSRNOP0000000399296.526194.1687
MGP_AJ_G0018667mus_musculus_ajMGP_AJ_P0030597100100mus_musculus_balbcjMGP_BALBcJ_P0030592100100
MGP_AJ_G0018667mus_musculus_ajMGP_AJ_P003059799.750999.3773mus_spicilegusENSMSIP0000002803499.750999.3773
MGP_AJ_G0018667mus_musculus_ajMGP_AJ_P0030597100100mus_musculus_nzohlltjMGP_NZOHlLtJ_P0031123100100
MGP_AJ_G0018667mus_musculus_ajMGP_AJ_P0030597100100mus_musculus_nodshiltjMGP_NODShiLtJ_P0030418100100

Gene Ontology

Go ID Go term No. evidence Entries Species Category

Expression