Description

Ensembl ID MGP_AJ_G0017479 Gene ID Accession -
Symbol Mbd3 Alias - Full Name methyl-CpG binding domain protein 3
Status Confidence Length 7002 bases Strand Minus strand
Position 10 : 78160547 - 78167548 RNA binding domain MBD
Summary N.A.

RNA binding domains (RBDs)

Protein Domain Pfam ID E-value Domain number
MGP_AJ_P0026250 MBD PF01429 9.9e-23 1

RNA binding proteomes (RBPomes)

Pubmed ID Full Name Cell Author Time Doi

Literatures on RNA binding capacity

Pubmed ID Title Author Time Journal

Transcripts

Name Transcript ID bp Protein Translation ID
Mbd3-001 MGP_AJ_T0026249 1248 253aa MGP_AJ_P0026249"/note="transcript_id=MGP_AJ_T0026249
- MGP_AJ_T0026250 1662 285aa MGP_AJ_P0026250"/note="transcript_id=MGP_AJ_T0026250
- MGP_AJ_T0026251 1222 281aa MGP_AJ_P0026251"/note="transcript_id=MGP_AJ_T0026251
- MGP_AJ_T0026252 914 261aa MGP_AJ_P0026252"/note="transcript_id=MGP_AJ_T0026252
- MGP_AJ_T0026253 530 No protein -

Pathways

Pathway ID Pathway Name Source

Phenotypes

ensgID Trait pValue Pubmed ID

GWAS

ensgIDSNPChromosomePosition TraitPubmedIDOr or BEAT EFO ID

Protein-Protein Interaction (PPI)

Paralogs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
MGP_AJ_G0017479mus_musculus_ajMGP_AJ_P005002955.555646.1353mus_musculus_ajMGP_AJ_P002625080.701867.0175
MGP_AJ_G0017479mus_musculus_ajMGP_AJ_P009134943.859623.6842mus_musculus_ajMGP_AJ_P002625035.087718.9474
MGP_AJ_G0017479mus_musculus_ajMGP_AJ_P009135454.301133.871mus_musculus_ajMGP_AJ_P002625035.438622.1053
MGP_AJ_G0017479mus_musculus_ajMGP_AJ_P005006022.413812.2414mus_musculus_ajMGP_AJ_P002625045.61424.9123

Orthologs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
MGP_AJ_G0017479mus_musculus_ajMGP_AJ_P0026250100100mus_caroliMGP_CAROLIEiJ_P0023942100100
MGP_AJ_G0017479mus_musculus_ajMGP_AJ_P0026250100100mus_musculus_cbajMGP_CBAJ_P0025952100100
MGP_AJ_G0017479mus_musculus_ajMGP_AJ_P002625099.649199.6491mus_pahariMGP_PahariEiJ_P008709399.649199.6491
MGP_AJ_G0017479mus_musculus_ajMGP_AJ_P0026250100100mus_musculus_akrjMGP_AKRJ_P0026214100100
MGP_AJ_G0017479mus_musculus_ajMGP_AJ_P0026250100100mus_musculusENSMUSP00000089948100100
MGP_AJ_G0017479mus_musculus_ajMGP_AJ_P0026250100100mus_musculus_c57bl6njMGP_C57BL6NJ_P0026712100100
MGP_AJ_G0017479mus_musculus_ajMGP_AJ_P0026250100100mus_musculus_129s1svimjMGP_129S1SvImJ_P0026273100100
MGP_AJ_G0017479mus_musculus_ajMGP_AJ_P0026250100100mus_musculus_fvbnjMGP_FVBNJ_P0026071100100
MGP_AJ_G0017479mus_musculus_ajMGP_AJ_P0026250100100mus_musculus_dba2jMGP_DBA2J_P0026077100100
MGP_AJ_G0017479mus_musculus_ajMGP_AJ_P0026250100100mus_musculus_lpjMGP_LPJ_P0026185100100
MGP_AJ_G0017479mus_musculus_ajMGP_AJ_P0026250100100mus_musculus_c3hhejMGP_C3HHeJ_P0026024100100
MGP_AJ_G0017479mus_musculus_ajMGP_AJ_P0026250100100mus_spretusMGP_SPRETEiJ_P0025106100100
MGP_AJ_G0017479mus_musculus_ajMGP_AJ_P0026250100100mus_musculus_wsbeijMGP_WSBEiJ_P0025556100100
MGP_AJ_G0017479mus_musculus_ajMGP_AJ_P0026250100100mus_musculus_pwkphjMGP_PWKPhJ_P0025299100100
MGP_AJ_G0017479mus_musculus_ajMGP_AJ_P0026250100100mus_musculus_casteijMGP_CASTEiJ_P0025589100100
MGP_AJ_G0017479mus_musculus_ajMGP_AJ_P002625088.421188.4211rattus_norvegicusENSRNOP0000004124289.361789.3617
MGP_AJ_G0017479mus_musculus_ajMGP_AJ_P0026250100100mus_musculus_balbcjMGP_BALBcJ_P0026220100100
MGP_AJ_G0017479mus_musculus_ajMGP_AJ_P0026250100100mus_spicilegusENSMSIP00000008426100100
MGP_AJ_G0017479mus_musculus_ajMGP_AJ_P0026250100100mus_musculus_nzohlltjMGP_NZOHlLtJ_P0026758100100
MGP_AJ_G0017479mus_musculus_ajMGP_AJ_P0026250100100mus_musculus_nodshiltjMGP_NODShiLtJ_P0026068100100

Gene Ontology

Go ID Go term No. evidence Entries Species Category

Expression