Description

Ensembl ID MGP_129S1SvImJ_G0035134 Gene ID Accession -
Symbol U2surp Alias - Full Name U2 snRNP-associated SURP domain containing
Status Confidence Length 63505 bases Strand Minus strand
Position 9 : 96569715 - 96633219 RNA binding domain RRM_1 , Surp , cwf21 , CID
Summary N.A.

RNA binding domains (RBDs)

Protein Domain Pfam ID E-value Domain number
MGP_129S1SvImJ_P0093646 RRM_1 PF00076 1.9e-14 1
MGP_129S1SvImJ_P0093645 RRM_1 PF00076 5.4e-14 1
MGP_129S1SvImJ_P0093645 Surp PF01805 2.3e-18 2
MGP_129S1SvImJ_P0093645 cwf21 PF08312 9e-10 3
MGP_129S1SvImJ_P0093645 CID PF04818 6.1e-08 4
MGP_129S1SvImJ_P0093644 RRM_1 PF00076 5.7e-14 1
MGP_129S1SvImJ_P0093644 Surp PF01805 2.5e-18 2
MGP_129S1SvImJ_P0093644 cwf21 PF08312 9.5e-10 3
MGP_129S1SvImJ_P0093644 CID PF04818 6.6e-08 4
MGP_129S1SvImJ_P0093647 RRM_1 PF00076 5.7e-14 1
MGP_129S1SvImJ_P0093647 Surp PF01805 2.5e-18 2
MGP_129S1SvImJ_P0093647 cwf21 PF08312 9.5e-10 3
MGP_129S1SvImJ_P0093647 CID PF04818 6.5e-08 4

RNA binding proteomes (RBPomes)

Pubmed ID Full Name Cell Author Time Doi

Literatures on RNA binding capacity

Pubmed ID Title Author Time Journal

Transcripts

Name Transcript ID bp Protein Translation ID
U2surp-001 MGP_129S1SvImJ_T0093644 7622 1029aa MGP_129S1SvImJ_P0093644"/note="transcript_id=MGP_129S1SvImJ_T0093644
- MGP_129S1SvImJ_T0093645 3520 985aa MGP_129S1SvImJ_P0093645"/note="transcript_id=MGP_129S1SvImJ_T0093645
- MGP_129S1SvImJ_T0093646 3231 425aa MGP_129S1SvImJ_P0093646"/note="transcript_id=MGP_129S1SvImJ_T0093646
- MGP_129S1SvImJ_T0093647 3087 1028aa MGP_129S1SvImJ_P0093647"/note="transcript_id=MGP_129S1SvImJ_T0093647
- MGP_129S1SvImJ_T0093648 3858 No protein -
- MGP_129S1SvImJ_T0093649 612 203aa MGP_129S1SvImJ_P0093649"/note="transcript_id=MGP_129S1SvImJ_T0093649
- MGP_129S1SvImJ_T0093650 231 76aa MGP_129S1SvImJ_P0093650"/note="transcript_id=MGP_129S1SvImJ_T0093650
- MGP_129S1SvImJ_T0093651 650 No protein -
- MGP_129S1SvImJ_T0093652 2846 No protein -

Pathways

Pathway ID Pathway Name Source

Phenotypes

ensgID Trait pValue Pubmed ID

GWAS

ensgIDSNPChromosomePosition TraitPubmedIDOr or BEAT EFO ID

Paralogs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
MGP_129S1SvImJ_G0035134

Orthologs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
MGP_129S1SvImJ_G0035134mus_musculus_129s1svimjMGP_129S1SvImJ_P009364417.978617.9786mus_caroliMGP_CAROLIEiJ_P008908791.13391.133
MGP_129S1SvImJ_G0035134mus_musculus_129s1svimjMGP_129S1SvImJ_P009364499.708599.7085mus_musculus_cbajMGP_CBAJ_P009315499.708599.7085
MGP_129S1SvImJ_G0035134mus_musculus_129s1svimjMGP_129S1SvImJ_P0093644100100mus_musculus_c3hhejMGP_C3HHeJ_P0093234100100
MGP_129S1SvImJ_G0035134mus_musculus_129s1svimjMGP_129S1SvImJ_P009364499.902899.9028mus_musculus_akrjMGP_AKRJ_P009368299.902899.9028
MGP_129S1SvImJ_G0035134mus_musculus_129s1svimjMGP_129S1SvImJ_P009364499.611399.6113mus_musculus_casteijMGP_CASTEiJ_P009382999.611399.6113
MGP_129S1SvImJ_G0035134mus_musculus_129s1svimjMGP_129S1SvImJ_P00936447.385817.38581mus_musculus_nodshiltjMGP_NODShiLtJ_P0093205100100
MGP_129S1SvImJ_G0035134mus_musculus_129s1svimjMGP_129S1SvImJ_P009364499.902899.9028mus_musculus_fvbnjMGP_FVBNJ_P009322199.902899.9028
MGP_129S1SvImJ_G0035134mus_musculus_129s1svimjMGP_129S1SvImJ_P009364499.902899.9028mus_spretusMGP_SPRETEiJ_P009277599.902899.9028
MGP_129S1SvImJ_G0035134mus_musculus_129s1svimjMGP_129S1SvImJ_P0093644100100mus_musculus_wsbeijMGP_WSBEiJ_P0092233100100
MGP_129S1SvImJ_G0035134mus_musculus_129s1svimjMGP_129S1SvImJ_P0093644100100mus_musculus_dba2jMGP_DBA2J_P0093362100100
MGP_129S1SvImJ_G0035134mus_musculus_129s1svimjMGP_129S1SvImJ_P0093644100100mus_musculus_balbcjMGP_BALBcJ_P0093658100100
MGP_129S1SvImJ_G0035134mus_musculus_129s1svimjMGP_129S1SvImJ_P009364499.902899.9028mus_musculus_nzohlltjMGP_NZOHlLtJ_P009449899.902899.9028
MGP_129S1SvImJ_G0035134mus_musculus_129s1svimjMGP_129S1SvImJ_P0093644100100mus_musculus_ajMGP_AJ_P0093729100100
MGP_129S1SvImJ_G0035134mus_musculus_129s1svimjMGP_129S1SvImJ_P009364499.805699.8056mus_pahariMGP_PahariEiJ_P002474299.805699.8056
MGP_129S1SvImJ_G0035134mus_musculus_129s1svimjMGP_129S1SvImJ_P009364499.611399.4169rattus_norvegicusENSRNOP0000008393599.611399.4169
MGP_129S1SvImJ_G0035134mus_musculus_129s1svimjMGP_129S1SvImJ_P0093644100100mus_musculusENSMUSP00000078602100100
MGP_129S1SvImJ_G0035134mus_musculus_129s1svimjMGP_129S1SvImJ_P0093644100100mus_musculus_c57bl6njMGP_C57BL6NJ_P0094170100100
MGP_129S1SvImJ_G0035134mus_musculus_129s1svimjMGP_129S1SvImJ_P009364499.902899.9028mus_musculus_pwkphjMGP_PWKPhJ_P009326499.902899.9028
MGP_129S1SvImJ_G0035134mus_musculus_129s1svimjMGP_129S1SvImJ_P009364499.028298.931mus_spicilegusENSMSIP0000001988196.222996.1284
MGP_129S1SvImJ_G0035134mus_musculus_129s1svimjMGP_129S1SvImJ_P0093644100100mus_musculus_lpjMGP_LPJ_P0093374100100

Gene Ontology

Go ID Go term No. evidence Entries Species Category

Expression