RBP Type |
N.A. |
Diseases |
|
Drug |
|
Main interacting RNAs |
|
Moonlighting functions |
|
Localizations |
|
BulkPerturb-seq
|
|
Ensembl ID | MGP_129S1SvImJ_G0035134 | Gene ID |
|
Accession |
- |
Symbol |
U2surp |
Alias |
- |
Full Name |
U2 snRNP-associated SURP domain containing |
Status |
Confidence |
Length |
63505 bases |
Strand |
Minus strand |
Position |
9 : 96569715 - 96633219 |
RNA binding domain |
RRM_1 , Surp , cwf21 , CID |
Summary |
N.A. |
RNA binding domains (RBDs)
Protein |
Domain |
Pfam ID |
E-value |
Domain number |
MGP_129S1SvImJ_P0093646 |
RRM_1 |
PF00076 |
1.9e-14 |
1 |
MGP_129S1SvImJ_P0093645 |
RRM_1 |
PF00076 |
5.4e-14 |
1 |
MGP_129S1SvImJ_P0093645 |
Surp |
PF01805 |
2.3e-18 |
2 |
MGP_129S1SvImJ_P0093645 |
cwf21 |
PF08312 |
9e-10 |
3 |
MGP_129S1SvImJ_P0093645 |
CID |
PF04818 |
6.1e-08 |
4 |
MGP_129S1SvImJ_P0093644 |
RRM_1 |
PF00076 |
5.7e-14 |
1 |
MGP_129S1SvImJ_P0093644 |
Surp |
PF01805 |
2.5e-18 |
2 |
MGP_129S1SvImJ_P0093644 |
cwf21 |
PF08312 |
9.5e-10 |
3 |
MGP_129S1SvImJ_P0093644 |
CID |
PF04818 |
6.6e-08 |
4 |
MGP_129S1SvImJ_P0093647 |
RRM_1 |
PF00076 |
5.7e-14 |
1 |
MGP_129S1SvImJ_P0093647 |
Surp |
PF01805 |
2.5e-18 |
2 |
MGP_129S1SvImJ_P0093647 |
cwf21 |
PF08312 |
9.5e-10 |
3 |
MGP_129S1SvImJ_P0093647 |
CID |
PF04818 |
6.5e-08 |
4 |
RNA binding proteomes (RBPomes)
Pubmed ID |
Full Name |
Cell |
Author |
Time |
Doi |
Literatures on RNA binding capacity
Pubmed ID |
Title |
Author |
Time |
Journal |
Name |
Transcript ID |
bp |
Protein |
Translation ID |
U2surp-001 |
MGP_129S1SvImJ_T0093644 |
7622 |
1029aa |
MGP_129S1SvImJ_P0093644"/note="transcript_id=MGP_129S1SvImJ_T0093644 |
- |
MGP_129S1SvImJ_T0093645 |
3520 |
985aa |
MGP_129S1SvImJ_P0093645"/note="transcript_id=MGP_129S1SvImJ_T0093645 |
- |
MGP_129S1SvImJ_T0093646 |
3231 |
425aa |
MGP_129S1SvImJ_P0093646"/note="transcript_id=MGP_129S1SvImJ_T0093646 |
- |
MGP_129S1SvImJ_T0093647 |
3087 |
1028aa |
MGP_129S1SvImJ_P0093647"/note="transcript_id=MGP_129S1SvImJ_T0093647 |
- |
MGP_129S1SvImJ_T0093648 |
3858 |
No protein |
- |
- |
MGP_129S1SvImJ_T0093649 |
612 |
203aa |
MGP_129S1SvImJ_P0093649"/note="transcript_id=MGP_129S1SvImJ_T0093649 |
- |
MGP_129S1SvImJ_T0093650 |
231 |
76aa |
MGP_129S1SvImJ_P0093650"/note="transcript_id=MGP_129S1SvImJ_T0093650 |
- |
MGP_129S1SvImJ_T0093651 |
650 |
No protein |
- |
- |
MGP_129S1SvImJ_T0093652 |
2846 |
No protein |
- |
Pathway ID |
Pathway Name |
Source |
| | |
ensgID |
Trait |
pValue |
Pubmed ID |
ensgID | SNP | Chromosome | Position |
Trait | PubmedID | Or or BEAT |
EFO ID |
Protein-Protein Interaction (PPI)
Ensembl ID |
Source |
Target |
Species |
Protein ID |
Perc_pos |
Perc_id |
Species |
Protein ID |
Perc_pos |
Perc_id |
MGP_129S1SvImJ_G0035134 | | | | | | | | |
Ensembl ID |
Source |
Target |
Species |
Protein ID |
Perc_pos |
Perc_id |
Species |
Protein ID |
Perc_pos |
Perc_id |
MGP_129S1SvImJ_G0035134 | mus_musculus_129s1svimj | MGP_129S1SvImJ_P0093644 | 17.9786 | 17.9786 | mus_caroli | MGP_CAROLIEiJ_P0089087 | 91.133 | 91.133 |
MGP_129S1SvImJ_G0035134 | mus_musculus_129s1svimj | MGP_129S1SvImJ_P0093644 | 99.7085 | 99.7085 | mus_musculus_cbaj | MGP_CBAJ_P0093154 | 99.7085 | 99.7085 |
MGP_129S1SvImJ_G0035134 | mus_musculus_129s1svimj | MGP_129S1SvImJ_P0093644 | 100 | 100 | mus_musculus_c3hhej | MGP_C3HHeJ_P0093234 | 100 | 100 |
MGP_129S1SvImJ_G0035134 | mus_musculus_129s1svimj | MGP_129S1SvImJ_P0093644 | 99.9028 | 99.9028 | mus_musculus_akrj | MGP_AKRJ_P0093682 | 99.9028 | 99.9028 |
MGP_129S1SvImJ_G0035134 | mus_musculus_129s1svimj | MGP_129S1SvImJ_P0093644 | 99.6113 | 99.6113 | mus_musculus_casteij | MGP_CASTEiJ_P0093829 | 99.6113 | 99.6113 |
MGP_129S1SvImJ_G0035134 | mus_musculus_129s1svimj | MGP_129S1SvImJ_P0093644 | 7.38581 | 7.38581 | mus_musculus_nodshiltj | MGP_NODShiLtJ_P0093205 | 100 | 100 |
MGP_129S1SvImJ_G0035134 | mus_musculus_129s1svimj | MGP_129S1SvImJ_P0093644 | 99.9028 | 99.9028 | mus_musculus_fvbnj | MGP_FVBNJ_P0093221 | 99.9028 | 99.9028 |
MGP_129S1SvImJ_G0035134 | mus_musculus_129s1svimj | MGP_129S1SvImJ_P0093644 | 99.9028 | 99.9028 | mus_spretus | MGP_SPRETEiJ_P0092775 | 99.9028 | 99.9028 |
MGP_129S1SvImJ_G0035134 | mus_musculus_129s1svimj | MGP_129S1SvImJ_P0093644 | 100 | 100 | mus_musculus_wsbeij | MGP_WSBEiJ_P0092233 | 100 | 100 |
MGP_129S1SvImJ_G0035134 | mus_musculus_129s1svimj | MGP_129S1SvImJ_P0093644 | 100 | 100 | mus_musculus_dba2j | MGP_DBA2J_P0093362 | 100 | 100 |
MGP_129S1SvImJ_G0035134 | mus_musculus_129s1svimj | MGP_129S1SvImJ_P0093644 | 100 | 100 | mus_musculus_balbcj | MGP_BALBcJ_P0093658 | 100 | 100 |
MGP_129S1SvImJ_G0035134 | mus_musculus_129s1svimj | MGP_129S1SvImJ_P0093644 | 99.9028 | 99.9028 | mus_musculus_nzohlltj | MGP_NZOHlLtJ_P0094498 | 99.9028 | 99.9028 |
MGP_129S1SvImJ_G0035134 | mus_musculus_129s1svimj | MGP_129S1SvImJ_P0093644 | 100 | 100 | mus_musculus_aj | MGP_AJ_P0093729 | 100 | 100 |
MGP_129S1SvImJ_G0035134 | mus_musculus_129s1svimj | MGP_129S1SvImJ_P0093644 | 99.8056 | 99.8056 | mus_pahari | MGP_PahariEiJ_P0024742 | 99.8056 | 99.8056 |
MGP_129S1SvImJ_G0035134 | mus_musculus_129s1svimj | MGP_129S1SvImJ_P0093644 | 99.6113 | 99.4169 | rattus_norvegicus | ENSRNOP00000083935 | 99.6113 | 99.4169 |
MGP_129S1SvImJ_G0035134 | mus_musculus_129s1svimj | MGP_129S1SvImJ_P0093644 | 100 | 100 | mus_musculus | ENSMUSP00000078602 | 100 | 100 |
MGP_129S1SvImJ_G0035134 | mus_musculus_129s1svimj | MGP_129S1SvImJ_P0093644 | 100 | 100 | mus_musculus_c57bl6nj | MGP_C57BL6NJ_P0094170 | 100 | 100 |
MGP_129S1SvImJ_G0035134 | mus_musculus_129s1svimj | MGP_129S1SvImJ_P0093644 | 99.9028 | 99.9028 | mus_musculus_pwkphj | MGP_PWKPhJ_P0093264 | 99.9028 | 99.9028 |
MGP_129S1SvImJ_G0035134 | mus_musculus_129s1svimj | MGP_129S1SvImJ_P0093644 | 99.0282 | 98.931 | mus_spicilegus | ENSMSIP00000019881 | 96.2229 | 96.1284 |
MGP_129S1SvImJ_G0035134 | mus_musculus_129s1svimj | MGP_129S1SvImJ_P0093644 | 100 | 100 | mus_musculus_lpj | MGP_LPJ_P0093374 | 100 | 100 |
Go ID |
Go term |
No. evidence |
Entries |
Species |
Category |