RBP Type |
N.A. |
Diseases |
|
Drug |
|
Main interacting RNAs |
|
Moonlighting functions |
|
Localizations |
|
BulkPerturb-seq
|
|
Ensembl ID | MGP_129S1SvImJ_G0031972 | Gene ID |
|
Accession |
- |
Symbol |
Fam98c |
Alias |
- |
Full Name |
family with sequence similarity 98, member C |
Status |
Confidence |
Length |
3721 bases |
Strand |
Minus strand |
Position |
7 : 28059888 - 28063608 |
RNA binding domain |
DUF2465 |
Summary |
N.A. |
RNA binding domains (RBDs)
Protein |
Domain |
Pfam ID |
E-value |
Domain number |
MGP_129S1SvImJ_P0082737 |
DUF2465 |
PF10239 |
1.4e-92 |
1 |
MGP_129S1SvImJ_P0082744 |
DUF2465 |
PF10239 |
2.5e-66 |
1 |
MGP_129S1SvImJ_P0082742 |
DUF2465 |
PF10239 |
2.6e-53 |
1 |
MGP_129S1SvImJ_P0082742 |
DUF2465 |
PF10239 |
2.6e-53 |
2 |
MGP_129S1SvImJ_P0082742 |
DUF2465 |
PF10239 |
2.6e-53 |
3 |
MGP_129S1SvImJ_P0082743 |
DUF2465 |
PF10239 |
3e-49 |
1 |
MGP_129S1SvImJ_P0082743 |
DUF2465 |
PF10239 |
3e-49 |
2 |
MGP_129S1SvImJ_P0082741 |
DUF2465 |
PF10239 |
1.1e-48 |
1 |
MGP_129S1SvImJ_P0082745 |
DUF2465 |
PF10239 |
1.6e-16 |
1 |
RNA binding proteomes (RBPomes)
Pubmed ID |
Full Name |
Cell |
Author |
Time |
Doi |
Literatures on RNA binding capacity
Pubmed ID |
Title |
Author |
Time |
Journal |
Name |
Transcript ID |
bp |
Protein |
Translation ID |
Fam98c-001 |
MGP_129S1SvImJ_T0082737 |
1268 |
344aa |
MGP_129S1SvImJ_P0082737"/note="transcript_id=MGP_129S1SvImJ_T0082737 |
- |
MGP_129S1SvImJ_T0082738 |
2165 |
No protein |
- |
- |
MGP_129S1SvImJ_T0082739 |
1359 |
No protein |
- |
- |
MGP_129S1SvImJ_T0082740 |
1632 |
No protein |
- |
- |
MGP_129S1SvImJ_T0082741 |
1189 |
142aa |
MGP_129S1SvImJ_P0082741"/note="transcript_id=MGP_129S1SvImJ_T0082741 |
- |
MGP_129S1SvImJ_T0082742 |
964 |
258aa |
MGP_129S1SvImJ_P0082742"/note="transcript_id=MGP_129S1SvImJ_T0082742 |
- |
MGP_129S1SvImJ_T0082743 |
791 |
212aa |
MGP_129S1SvImJ_P0082743"/note="transcript_id=MGP_129S1SvImJ_T0082743 |
- |
MGP_129S1SvImJ_T0082744 |
884 |
273aa |
MGP_129S1SvImJ_P0082744"/note="transcript_id=MGP_129S1SvImJ_T0082744 |
- |
MGP_129S1SvImJ_T0082745 |
405 |
135aa |
MGP_129S1SvImJ_P0082745"/note="transcript_id=MGP_129S1SvImJ_T0082745 |
- |
MGP_129S1SvImJ_T0082746 |
779 |
No protein |
- |
Pathway ID |
Pathway Name |
Source |
| | |
ensgID |
Trait |
pValue |
Pubmed ID |
ensgID | SNP | Chromosome | Position |
Trait | PubmedID | Or or BEAT |
EFO ID |
Protein-Protein Interaction (PPI)
Ensembl ID |
Source |
Target |
Species |
Protein ID |
Perc_pos |
Perc_id |
Species |
Protein ID |
Perc_pos |
Perc_id |
MGP_129S1SvImJ_G0031972 | mus_musculus_129s1svimj | MGP_129S1SvImJ_P0056764 | 45.5399 | 29.8122 | mus_musculus_129s1svimj | MGP_129S1SvImJ_P0082737 | 56.3953 | 36.9186 |
MGP_129S1SvImJ_G0031972 | mus_musculus_129s1svimj | MGP_129S1SvImJ_P0048607 | 37.0874 | 25.8252 | mus_musculus_129s1svimj | MGP_129S1SvImJ_P0082737 | 55.5233 | 38.6628 |
Ensembl ID |
Source |
Target |
Species |
Protein ID |
Perc_pos |
Perc_id |
Species |
Protein ID |
Perc_pos |
Perc_id |
MGP_129S1SvImJ_G0031972 | mus_musculus_129s1svimj | MGP_129S1SvImJ_P0082737 | 99.4186 | 98.8372 | mus_caroli | MGP_CAROLIEiJ_P0078480 | 99.4186 | 98.8372 |
MGP_129S1SvImJ_G0031972 | mus_musculus_129s1svimj | MGP_129S1SvImJ_P0082737 | 99.4186 | 99.1279 | mus_musculus_cbaj | MGP_CBAJ_P0082308 | 99.4186 | 99.1279 |
MGP_129S1SvImJ_G0031972 | mus_musculus_129s1svimj | MGP_129S1SvImJ_P0082737 | 99.4186 | 99.1279 | mus_musculus_c3hhej | MGP_C3HHeJ_P0082360 | 99.4186 | 99.1279 |
MGP_129S1SvImJ_G0031972 | mus_musculus_129s1svimj | MGP_129S1SvImJ_P0082737 | 99.4186 | 99.1279 | mus_musculus_akrj | MGP_AKRJ_P0082740 | 99.4186 | 99.1279 |
MGP_129S1SvImJ_G0031972 | mus_musculus_129s1svimj | MGP_129S1SvImJ_P0082737 | 100 | 99.7093 | mus_musculus_casteij | MGP_CASTEiJ_P0082878 | 100 | 99.7093 |
MGP_129S1SvImJ_G0031972 | mus_musculus_129s1svimj | MGP_129S1SvImJ_P0082737 | 99.4186 | 99.1279 | mus_musculus_nodshiltj | MGP_NODShiLtJ_P0082371 | 99.4186 | 99.1279 |
MGP_129S1SvImJ_G0031972 | mus_musculus_129s1svimj | MGP_129S1SvImJ_P0082737 | 100 | 100 | mus_musculus_fvbnj | MGP_FVBNJ_P0082352 | 100 | 100 |
MGP_129S1SvImJ_G0031972 | mus_musculus_129s1svimj | MGP_129S1SvImJ_P0082737 | 99.1279 | 98.2558 | mus_spretus | MGP_SPRETEiJ_P0081793 | 99.1279 | 98.2558 |
MGP_129S1SvImJ_G0031972 | mus_musculus_129s1svimj | MGP_129S1SvImJ_P0082737 | 99.1279 | 98.8372 | mus_musculus_wsbeij | MGP_WSBEiJ_P0081412 | 99.1279 | 98.8372 |
MGP_129S1SvImJ_G0031972 | mus_musculus_129s1svimj | MGP_129S1SvImJ_P0082737 | 99.4186 | 99.1279 | mus_musculus_dba2j | MGP_DBA2J_P0082468 | 99.4186 | 99.1279 |
MGP_129S1SvImJ_G0031972 | mus_musculus_129s1svimj | MGP_129S1SvImJ_P0082737 | 99.7093 | 99.7093 | mus_musculus_balbcj | MGP_BALBcJ_P0082769 | 99.7093 | 99.7093 |
MGP_129S1SvImJ_G0031972 | mus_musculus_129s1svimj | MGP_129S1SvImJ_P0082737 | 99.4186 | 99.1279 | mus_musculus_nzohlltj | MGP_NZOHlLtJ_P0083516 | 99.4186 | 99.1279 |
MGP_129S1SvImJ_G0031972 | mus_musculus_129s1svimj | MGP_129S1SvImJ_P0082737 | 99.7093 | 99.7093 | mus_musculus_aj | MGP_AJ_P0082809 | 99.7093 | 99.7093 |
MGP_129S1SvImJ_G0031972 | mus_musculus_129s1svimj | MGP_129S1SvImJ_P0082737 | 97.3837 | 95.9302 | mus_pahari | MGP_PahariEiJ_P0015363 | 97.1014 | 95.6522 |
MGP_129S1SvImJ_G0031972 | mus_musculus_129s1svimj | MGP_129S1SvImJ_P0082737 | 95.3488 | 93.0233 | rattus_norvegicus | ENSRNOP00000053799 | 96.1877 | 93.8416 |
MGP_129S1SvImJ_G0031972 | mus_musculus_129s1svimj | MGP_129S1SvImJ_P0082737 | 99.4186 | 99.1279 | mus_musculus | ENSMUSP00000131477 | 99.4186 | 99.1279 |
MGP_129S1SvImJ_G0031972 | mus_musculus_129s1svimj | MGP_129S1SvImJ_P0082737 | 99.4186 | 99.1279 | mus_musculus_c57bl6nj | MGP_C57BL6NJ_P0083232 | 99.4186 | 99.1279 |
MGP_129S1SvImJ_G0031972 | mus_musculus_129s1svimj | MGP_129S1SvImJ_P0082737 | 100 | 99.7093 | mus_musculus_pwkphj | MGP_PWKPhJ_P0082314 | 100 | 99.7093 |
MGP_129S1SvImJ_G0031972 | mus_musculus_129s1svimj | MGP_129S1SvImJ_P0082737 | 100 | 99.7093 | mus_spicilegus | ENSMSIP00000023967 | 100 | 99.7093 |
MGP_129S1SvImJ_G0031972 | mus_musculus_129s1svimj | MGP_129S1SvImJ_P0082737 | 99.4186 | 99.1279 | mus_musculus_lpj | MGP_LPJ_P0082491 | 99.4186 | 99.1279 |
Go ID |
Go term |
No. evidence |
Entries |
Species |
Category |