| RBP Type |
N.A. |
| Diseases |
|
| Drug |
|
| Main interacting RNAs |
|
| Moonlighting functions |
|
| Localizations |
|
|
BulkPerturb-seq
|
|
| Ensembl ID | MGP_129S1SvImJ_G0031073 | Gene ID |
|
Accession |
- |
| Symbol |
Tmf1 |
Alias |
- |
Full Name |
TATA element modulatory factor 1 |
| Status |
Confidence |
Length |
27776 bases |
Strand |
Minus strand |
| Position |
6 : 98980448 - 99008223 |
RNA binding domain |
TMF_TATA_bd , TMF_DNA_bd |
| Summary |
N.A. |
RNA binding domains (RBDs)
| Protein |
Domain |
Pfam ID |
E-value |
Domain number |
| MGP_129S1SvImJ_P0079043 |
TMF_TATA_bd |
PF12325 |
3.4e-31 |
1 |
| MGP_129S1SvImJ_P0079043 |
TMF_DNA_bd |
PF12329 |
1.4e-20 |
2 |
| MGP_129S1SvImJ_P0079044 |
TMF_DNA_bd |
PF12329 |
9.3e-21 |
1 |
RNA binding proteomes (RBPomes)
| Pubmed ID |
Full Name |
Cell |
Author |
Time |
Doi |
Literatures on RNA binding capacity
| Pubmed ID |
Title |
Author |
Time |
Journal |
| Name |
Transcript ID |
bp |
Protein |
Translation ID |
| Tmf1-001 |
MGP_129S1SvImJ_T0079043 |
5588 |
1091aa |
MGP_129S1SvImJ_P0079043"/note="transcript_id=MGP_129S1SvImJ_T0079043 |
| - |
MGP_129S1SvImJ_T0079044 |
3191 |
784aa |
MGP_129S1SvImJ_P0079044"/note="transcript_id=MGP_129S1SvImJ_T0079044 |
| - |
MGP_129S1SvImJ_T0079045 |
524 |
No protein |
- |
| Pathway ID |
Pathway Name |
Source |
| | |
| ensgID |
Trait |
pValue |
Pubmed ID |
| ensgID | SNP | Chromosome | Position |
Trait | PubmedID | Or or BEAT |
EFO ID |
|---|
Protein-Protein Interaction (PPI)
| Ensembl ID |
Source |
Target |
| Species |
Protein ID |
Perc_pos |
Perc_id |
Species |
Protein ID |
Perc_pos |
Perc_id |
| MGP_129S1SvImJ_G0031073 | mus_musculus_129s1svimj | MGP_129S1SvImJ_P0073521 | 21.58 | 9.24856 | mus_musculus_129s1svimj | MGP_129S1SvImJ_P0079043 | 20.5316 | 8.79927 |
| MGP_129S1SvImJ_G0031073 | mus_musculus_129s1svimj | MGP_129S1SvImJ_P0072683 | 21.1001 | 7.30388 | mus_musculus_129s1svimj | MGP_129S1SvImJ_P0079043 | 21.4482 | 7.42438 |
| MGP_129S1SvImJ_G0031073 | mus_musculus_129s1svimj | MGP_129S1SvImJ_P0052836 | 15.6076 | 6.3541 | mus_musculus_129s1svimj | MGP_129S1SvImJ_P0079043 | 23.1897 | 9.44088 |
| MGP_129S1SvImJ_G0031073 | mus_musculus_129s1svimj | MGP_129S1SvImJ_P0029841 | 18.2812 | 8.04769 | mus_musculus_129s1svimj | MGP_129S1SvImJ_P0079043 | 33.7305 | 14.8488 |
| MGP_129S1SvImJ_G0031073 | mus_musculus_129s1svimj | MGP_129S1SvImJ_P0046892 | 20.0364 | 8.01457 | mus_musculus_129s1svimj | MGP_129S1SvImJ_P0079043 | 20.165 | 8.06599 |
| MGP_129S1SvImJ_G0031073 | mus_musculus_129s1svimj | MGP_129S1SvImJ_P0090060 | 27.6867 | 12.5683 | mus_musculus_129s1svimj | MGP_129S1SvImJ_P0079043 | 13.9322 | 6.32447 |
| MGP_129S1SvImJ_G0031073 | mus_musculus_129s1svimj | MGP_129S1SvImJ_P0089288 | 13.9348 | 6.42419 | mus_musculus_129s1svimj | MGP_129S1SvImJ_P0079043 | 27.0394 | 12.4656 |
| MGP_129S1SvImJ_G0031073 | mus_musculus_129s1svimj | MGP_129S1SvImJ_P0029775 | 18.6694 | 7.42651 | mus_musculus_129s1svimj | MGP_129S1SvImJ_P0079043 | 33.1806 | 13.1989 |
| MGP_129S1SvImJ_G0031073 | mus_musculus_129s1svimj | MGP_129S1SvImJ_P0029765 | 18.4021 | 7.31959 | mus_musculus_129s1svimj | MGP_129S1SvImJ_P0079043 | 32.7223 | 13.0156 |
| MGP_129S1SvImJ_G0031073 | mus_musculus_129s1svimj | MGP_129S1SvImJ_P0031184 | 22.2664 | 8.84692 | mus_musculus_129s1svimj | MGP_129S1SvImJ_P0079043 | 20.5316 | 8.15765 |
| MGP_129S1SvImJ_G0031073 | mus_musculus_129s1svimj | MGP_129S1SvImJ_P0027410 | 23.3941 | 10.0671 | mus_musculus_129s1svimj | MGP_129S1SvImJ_P0079043 | 22.3648 | 9.6242 |
| MGP_129S1SvImJ_G0031073 | mus_musculus_129s1svimj | MGP_129S1SvImJ_P0027997 | 21.4844 | 8.69141 | mus_musculus_129s1svimj | MGP_129S1SvImJ_P0079043 | 20.165 | 8.15765 |
| MGP_129S1SvImJ_G0031073 | mus_musculus_129s1svimj | MGP_129S1SvImJ_P0043272 | 19.0402 | 8.61713 | mus_musculus_129s1svimj | MGP_129S1SvImJ_P0079043 | 33.8222 | 15.3071 |
| MGP_129S1SvImJ_G0031073 | mus_musculus_129s1svimj | MGP_129S1SvImJ_P0029773 | 2.10526 | 0 | mus_musculus_129s1svimj | MGP_129S1SvImJ_P0079043 | 0.183318 | 0 |
| MGP_129S1SvImJ_G0031073 | mus_musculus_129s1svimj | MGP_129S1SvImJ_P0029768 | 16.7161 | 6.82493 | mus_musculus_129s1svimj | MGP_129S1SvImJ_P0079043 | 30.9808 | 12.6489 |
| MGP_129S1SvImJ_G0031073 | mus_musculus_129s1svimj | MGP_129S1SvImJ_P0062242 | 21.3087 | 9.64765 | mus_musculus_129s1svimj | MGP_129S1SvImJ_P0079043 | 23.2814 | 10.5408 |
| MGP_129S1SvImJ_G0031073 | mus_musculus_129s1svimj | MGP_129S1SvImJ_P0093078 | 20.1849 | 8.55162 | mus_musculus_129s1svimj | MGP_129S1SvImJ_P0079043 | 24.0147 | 10.1742 |
| MGP_129S1SvImJ_G0031073 | mus_musculus_129s1svimj | MGP_129S1SvImJ_P0088086 | 14.8641 | 6.81939 | mus_musculus_129s1svimj | MGP_129S1SvImJ_P0079043 | 25.5729 | 11.7324 |
| MGP_129S1SvImJ_G0031073 | mus_musculus_129s1svimj | MGP_129S1SvImJ_P0019724 | 22.007 | 9.15493 | mus_musculus_129s1svimj | MGP_129S1SvImJ_P0079043 | 22.9148 | 9.53254 |
| MGP_129S1SvImJ_G0031073 | mus_musculus_129s1svimj | MGP_129S1SvImJ_P0050088 | 17.8416 | 7.48373 | mus_musculus_129s1svimj | MGP_129S1SvImJ_P0079043 | 30.1558 | 12.6489 |
| MGP_129S1SvImJ_G0031073 | mus_musculus_129s1svimj | MGP_129S1SvImJ_P0039471 | 18.0171 | 7.03625 | mus_musculus_129s1svimj | MGP_129S1SvImJ_P0079043 | 30.9808 | 12.099 |
| MGP_129S1SvImJ_G0031073 | mus_musculus_129s1svimj | MGP_129S1SvImJ_P0093387 | 20.711 | 9.04173 | mus_musculus_129s1svimj | MGP_129S1SvImJ_P0079043 | 24.5646 | 10.7241 |
| MGP_129S1SvImJ_G0031073 | mus_musculus_129s1svimj | MGP_129S1SvImJ_P0031373 | 22.8453 | 10.5919 | mus_musculus_129s1svimj | MGP_129S1SvImJ_P0079043 | 20.165 | 9.34922 |
| MGP_129S1SvImJ_G0031073 | mus_musculus_129s1svimj | MGP_129S1SvImJ_P0029782 | 18.3179 | 7.27554 | mus_musculus_129s1svimj | MGP_129S1SvImJ_P0079043 | 32.539 | 12.9239 |
| MGP_129S1SvImJ_G0031073 | mus_musculus_129s1svimj | MGP_129S1SvImJ_P0030913 | 17.0907 | 7.63322 | mus_musculus_129s1svimj | MGP_129S1SvImJ_P0079043 | 32.6306 | 14.5738 |
| MGP_129S1SvImJ_G0031073 | mus_musculus_129s1svimj | MGP_129S1SvImJ_P0093233 | 17.4512 | 7.11825 | mus_musculus_129s1svimj | MGP_129S1SvImJ_P0079043 | 27.8643 | 11.3657 |
| MGP_129S1SvImJ_G0031073 | mus_musculus_129s1svimj | MGP_129S1SvImJ_P0030751 | 21.6369 | 9.40734 | mus_musculus_129s1svimj | MGP_129S1SvImJ_P0079043 | 21.0816 | 9.1659 |
| MGP_129S1SvImJ_G0031073 | mus_musculus_129s1svimj | MGP_129S1SvImJ_P0093039 | 19.4219 | 8.13008 | mus_musculus_129s1svimj | MGP_129S1SvImJ_P0079043 | 19.7067 | 8.24931 |
| MGP_129S1SvImJ_G0031073 | mus_musculus_129s1svimj | MGP_129S1SvImJ_P0041557 | 18.8265 | 8.46939 | mus_musculus_129s1svimj | MGP_129S1SvImJ_P0079043 | 33.8222 | 15.2154 |
| MGP_129S1SvImJ_G0031073 | mus_musculus_129s1svimj | MGP_129S1SvImJ_P0092667 | 12.2767 | 4.90308 | mus_musculus_129s1svimj | MGP_129S1SvImJ_P0079043 | 29.6059 | 11.824 |
| MGP_129S1SvImJ_G0031073 | mus_musculus_129s1svimj | MGP_129S1SvImJ_P0055185 | 16.3541 | 7.50188 | mus_musculus_129s1svimj | MGP_129S1SvImJ_P0079043 | 19.9817 | 9.1659 |
| MGP_129S1SvImJ_G0031073 | mus_musculus_129s1svimj | MGP_129S1SvImJ_P0040686 | 15.2279 | 6.98351 | mus_musculus_129s1svimj | MGP_129S1SvImJ_P0079043 | 28.7809 | 13.1989 |
| MGP_129S1SvImJ_G0031073 | mus_musculus_129s1svimj | MGP_129S1SvImJ_P0049178 | 15.1443 | 6.7203 | mus_musculus_129s1svimj | MGP_129S1SvImJ_P0079043 | 29.3309 | 13.0156 |
| MGP_129S1SvImJ_G0031073 | mus_musculus_129s1svimj | MGP_129S1SvImJ_P0029777 | 19.0976 | 7.66002 | mus_musculus_129s1svimj | MGP_129S1SvImJ_P0079043 | 33.3639 | 13.3822 |
| MGP_129S1SvImJ_G0031073 | mus_musculus_129s1svimj | MGP_129S1SvImJ_P0085071 | 14.7178 | 6.50113 | mus_musculus_129s1svimj | MGP_129S1SvImJ_P0079043 | 29.8808 | 13.1989 |
| MGP_129S1SvImJ_G0031073 | mus_musculus_129s1svimj | MGP_129S1SvImJ_P0083628 | 18.15 | 8 | mus_musculus_129s1svimj | MGP_129S1SvImJ_P0079043 | 33.2722 | 14.6654 |
| MGP_129S1SvImJ_G0031073 | mus_musculus_129s1svimj | MGP_129S1SvImJ_P0083629 | 18.15 | 8 | mus_musculus_129s1svimj | MGP_129S1SvImJ_P0079043 | 33.2722 | 14.6654 |
| MGP_129S1SvImJ_G0031073 | mus_musculus_129s1svimj | MGP_129S1SvImJ_P0058585 | 18.2895 | 8.08861 | mus_musculus_129s1svimj | MGP_129S1SvImJ_P0079043 | 32.539 | 14.3905 |
| MGP_129S1SvImJ_G0031073 | mus_musculus_129s1svimj | MGP_129S1SvImJ_P0039477 | 17.4721 | 7.0632 | mus_musculus_129s1svimj | MGP_129S1SvImJ_P0079043 | 30.1558 | 12.1907 |
| MGP_129S1SvImJ_G0031073 | mus_musculus_129s1svimj | MGP_129S1SvImJ_P0029459 | 9.74081 | 4.12988 | mus_musculus_129s1svimj | MGP_129S1SvImJ_P0079043 | 31.3474 | 13.2906 |
| MGP_129S1SvImJ_G0031073 | mus_musculus_129s1svimj | MGP_129S1SvImJ_P0093222 | 17.8976 | 7.33154 | mus_musculus_129s1svimj | MGP_129S1SvImJ_P0079043 | 30.4308 | 12.4656 |
| Ensembl ID |
Source |
Target |
| Species |
Protein ID |
Perc_pos |
Perc_id |
Species |
Protein ID |
Perc_pos |
Perc_id |
| MGP_129S1SvImJ_G0031073 | mus_musculus_129s1svimj | MGP_129S1SvImJ_P0079043 | 68.8359 | 67.5527 | mus_caroli | MGP_CAROLIEiJ_P0075146 | 95.9132 | 94.1252 |
| MGP_129S1SvImJ_G0031073 | mus_musculus_129s1svimj | MGP_129S1SvImJ_P0079043 | 100 | 100 | mus_musculus_cbaj | MGP_CBAJ_P0078642 | 100 | 100 |
| MGP_129S1SvImJ_G0031073 | mus_musculus_129s1svimj | MGP_129S1SvImJ_P0079043 | 98.5335 | 98.4418 | mus_musculus_c3hhej | MGP_C3HHeJ_P0078240 | 100 | 99.907 |
| MGP_129S1SvImJ_G0031073 | mus_musculus_129s1svimj | MGP_129S1SvImJ_P0079043 | 100 | 100 | mus_musculus_akrj | MGP_AKRJ_P0079038 | 100 | 100 |
| MGP_129S1SvImJ_G0031073 | mus_musculus_129s1svimj | MGP_129S1SvImJ_P0079043 | 99.6334 | 99.6334 | mus_musculus_casteij | MGP_CASTEiJ_P0079260 | 99.6334 | 99.6334 |
| MGP_129S1SvImJ_G0031073 | mus_musculus_129s1svimj | MGP_129S1SvImJ_P0079043 | 100 | 100 | mus_musculus_nodshiltj | MGP_NODShiLtJ_P0078682 | 100 | 100 |
| MGP_129S1SvImJ_G0031073 | mus_musculus_129s1svimj | MGP_129S1SvImJ_P0079043 | 100 | 100 | mus_musculus_fvbnj | MGP_FVBNJ_P0078679 | 100 | 100 |
| MGP_129S1SvImJ_G0031073 | mus_musculus_129s1svimj | MGP_129S1SvImJ_P0079043 | 99.5417 | 99.45 | mus_spretus | MGP_SPRETEiJ_P0078204 | 99.633 | 99.5413 |
| MGP_129S1SvImJ_G0031073 | mus_musculus_129s1svimj | MGP_129S1SvImJ_P0079043 | 100 | 100 | mus_musculus_wsbeij | MGP_WSBEiJ_P0077787 | 100 | 100 |
| MGP_129S1SvImJ_G0031073 | mus_musculus_129s1svimj | MGP_129S1SvImJ_P0079043 | 100 | 100 | mus_musculus_dba2j | MGP_DBA2J_P0078794 | 100 | 100 |
| MGP_129S1SvImJ_G0031073 | mus_musculus_129s1svimj | MGP_129S1SvImJ_P0079043 | 100 | 100 | mus_musculus_balbcj | MGP_BALBcJ_P0079058 | 100 | 100 |
| MGP_129S1SvImJ_G0031073 | mus_musculus_129s1svimj | MGP_129S1SvImJ_P0079043 | 100 | 100 | mus_musculus_nzohlltj | MGP_NZOHlLtJ_P0079778 | 100 | 100 |
| MGP_129S1SvImJ_G0031073 | mus_musculus_129s1svimj | MGP_129S1SvImJ_P0079043 | 100 | 100 | mus_musculus_aj | MGP_AJ_P0079116 | 100 | 100 |
| MGP_129S1SvImJ_G0031073 | mus_musculus_129s1svimj | MGP_129S1SvImJ_P0079043 | 98.3501 | 97.6169 | mus_pahari | MGP_PahariEiJ_P0051345 | 98.2601 | 97.5275 |
| MGP_129S1SvImJ_G0031073 | mus_musculus_129s1svimj | MGP_129S1SvImJ_P0079043 | 95.6004 | 93.8588 | rattus_norvegicus | ENSRNOP00000070908 | 95.4254 | 93.6871 |
| MGP_129S1SvImJ_G0031073 | mus_musculus_129s1svimj | MGP_129S1SvImJ_P0079043 | 100 | 100 | mus_musculus | ENSMUSP00000093325 | 100 | 100 |
| MGP_129S1SvImJ_G0031073 | mus_musculus_129s1svimj | MGP_129S1SvImJ_P0079043 | 100 | 100 | mus_musculus_c57bl6nj | MGP_C57BL6NJ_P0079525 | 100 | 100 |
| MGP_129S1SvImJ_G0031073 | mus_musculus_129s1svimj | MGP_129S1SvImJ_P0079043 | 99.725 | 99.725 | mus_musculus_pwkphj | MGP_PWKPhJ_P0078686 | 99.725 | 99.725 |
| MGP_129S1SvImJ_G0031073 | mus_musculus_129s1svimj | MGP_129S1SvImJ_P0079043 | 99.6334 | 99.3584 | mus_spicilegus | ENSMSIP00000037937 | 99.6334 | 99.3584 |
| MGP_129S1SvImJ_G0031073 | mus_musculus_129s1svimj | MGP_129S1SvImJ_P0079043 | 100 | 100 | mus_musculus_lpj | MGP_LPJ_P0078826 | 100 | 100 |
| Go ID |
Go term |
No. evidence |
Entries |
Species |
Category |
