Description

Ensembl ID MGP_129S1SvImJ_G0030191 Gene ID Accession -
Symbol Srrm3 Alias - Full Name serine/arginine repetitive matrix 3
Status Confidence Length 78284 bases Strand Plus strand
Position 5 : 140391379 - 140469662 RNA binding domain cwf21 , SRRM_C
Summary N.A.

RNA binding domains (RBDs)

Protein Domain Pfam ID E-value Domain number
MGP_129S1SvImJ_P0074976 cwf21 PF08312 1.6e-15 1
MGP_129S1SvImJ_P0074977 cwf21 PF08312 1.5e-14 1
MGP_129S1SvImJ_P0074978 cwf21 PF08312 3.4e-14 1
MGP_129S1SvImJ_P0074978 SRRM_C PF15230 5.1e-24 2

RNA binding proteomes (RBPomes)

Pubmed ID Full Name Cell Author Time Doi

Literatures on RNA binding capacity

Pubmed ID Title Author Time Journal

Transcripts

Name Transcript ID bp Protein Translation ID
Srrm3-004 MGP_129S1SvImJ_T0074975 1896 No protein -
- MGP_129S1SvImJ_T0074976 526 124aa MGP_129S1SvImJ_P0074976"/note="transcript_id=MGP_129S1SvImJ_T0074976
- MGP_129S1SvImJ_T0074977 2289 342aa MGP_129S1SvImJ_P0074977"/note="transcript_id=MGP_129S1SvImJ_T0074977
- MGP_129S1SvImJ_T0074978 3932 648aa MGP_129S1SvImJ_P0074978"/note="transcript_id=MGP_129S1SvImJ_T0074978
- MGP_129S1SvImJ_T0074979 681 No protein -
- MGP_129S1SvImJ_T0074980 567 No protein -

Pathways

Pathway ID Pathway Name Source

Phenotypes

ensgID Trait pValue Pubmed ID

GWAS

ensgIDSNPChromosomePosition TraitPubmedIDOr or BEAT EFO ID

Paralogs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
MGP_129S1SvImJ_G0030191

Orthologs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
MGP_129S1SvImJ_G0030191mus_musculus_129s1svimjMGP_129S1SvImJ_P007497852.314851.8519mus_caroliMGP_CAROLIEiJ_P007136899.122898.2456
MGP_129S1SvImJ_G0030191mus_musculus_129s1svimjMGP_129S1SvImJ_P0074978100100mus_musculus_cbajMGP_CBAJ_P0074582100100
MGP_129S1SvImJ_G0030191mus_musculus_129s1svimjMGP_129S1SvImJ_P0074978100100mus_musculus_c3hhejMGP_C3HHeJ_P0074633100100
MGP_129S1SvImJ_G0030191mus_musculus_129s1svimjMGP_129S1SvImJ_P0074978100100mus_musculus_akrjMGP_AKRJ_P0074963100100
MGP_129S1SvImJ_G0030191mus_musculus_129s1svimjMGP_129S1SvImJ_P007497899.53799.537mus_musculus_casteijMGP_CASTEiJ_P007518599.690999.6909
MGP_129S1SvImJ_G0030191mus_musculus_129s1svimjMGP_129S1SvImJ_P0074978100100mus_musculus_nodshiltjMGP_NODShiLtJ_P0074632100100
MGP_129S1SvImJ_G0030191mus_musculus_129s1svimjMGP_129S1SvImJ_P0074978100100mus_musculus_fvbnjMGP_FVBNJ_P0074630100100
MGP_129S1SvImJ_G0030191mus_musculus_129s1svimjMGP_129S1SvImJ_P007497899.691499.6914mus_spretusMGP_SPRETEiJ_P007411999.691499.6914
MGP_129S1SvImJ_G0030191mus_musculus_129s1svimjMGP_129S1SvImJ_P0074978100100mus_musculus_wsbeijMGP_WSBEiJ_P0073763100100
MGP_129S1SvImJ_G0030191mus_musculus_129s1svimjMGP_129S1SvImJ_P0074978100100mus_musculus_dba2jMGP_DBA2J_P0074729100100
MGP_129S1SvImJ_G0030191mus_musculus_129s1svimjMGP_129S1SvImJ_P0074978100100mus_musculus_balbcjMGP_BALBcJ_P0075005100100
MGP_129S1SvImJ_G0030191mus_musculus_129s1svimjMGP_129S1SvImJ_P0074978100100mus_musculus_nzohlltjMGP_NZOHlLtJ_P0075711100100
MGP_129S1SvImJ_G0030191mus_musculus_129s1svimjMGP_129S1SvImJ_P0074978100100mus_musculus_ajMGP_AJ_P0075061100100
MGP_129S1SvImJ_G0030191mus_musculus_129s1svimjMGP_129S1SvImJ_P007497899.53799.2284mus_pahariMGP_PahariEiJ_P005959999.53799.2284
MGP_129S1SvImJ_G0030191mus_musculus_129s1svimjMGP_129S1SvImJ_P007497897.993896.9136rattus_norvegicusENSRNOP0000000195797.993896.9136
MGP_129S1SvImJ_G0030191mus_musculus_129s1svimjMGP_129S1SvImJ_P0074978100100mus_musculusENSMUSP00000115695100100
MGP_129S1SvImJ_G0030191mus_musculus_129s1svimjMGP_129S1SvImJ_P0074978100100mus_musculus_c57bl6njMGP_C57BL6NJ_P0075474100100
MGP_129S1SvImJ_G0030191mus_musculus_129s1svimjMGP_129S1SvImJ_P007497899.845799.8457mus_musculus_pwkphjMGP_PWKPhJ_P007464599.845799.8457
MGP_129S1SvImJ_G0030191mus_musculus_129s1svimjMGP_129S1SvImJ_P007497810099.8457mus_spicilegusENSMSIP0000001418410099.8457
MGP_129S1SvImJ_G0030191mus_musculus_129s1svimjMGP_129S1SvImJ_P0074978100100mus_musculus_lpjMGP_LPJ_P0074785100100

Gene Ontology

Go ID Go term No. evidence Entries Species Category

Expression