RBP Type |
N.A. |
Diseases |
|
Drug |
|
Main interacting RNAs |
|
Moonlighting functions |
|
Localizations |
|
BulkPerturb-seq
|
|
Ensembl ID | MGP_129S1SvImJ_G0030191 | Gene ID |
|
Accession |
- |
Symbol |
Srrm3 |
Alias |
- |
Full Name |
serine/arginine repetitive matrix 3 |
Status |
Confidence |
Length |
78284 bases |
Strand |
Plus strand |
Position |
5 : 140391379 - 140469662 |
RNA binding domain |
cwf21 , SRRM_C |
Summary |
N.A. |
RNA binding domains (RBDs)
Protein |
Domain |
Pfam ID |
E-value |
Domain number |
MGP_129S1SvImJ_P0074976 |
cwf21 |
PF08312 |
1.6e-15 |
1 |
MGP_129S1SvImJ_P0074977 |
cwf21 |
PF08312 |
1.5e-14 |
1 |
MGP_129S1SvImJ_P0074978 |
cwf21 |
PF08312 |
3.4e-14 |
1 |
MGP_129S1SvImJ_P0074978 |
SRRM_C |
PF15230 |
5.1e-24 |
2 |
RNA binding proteomes (RBPomes)
Pubmed ID |
Full Name |
Cell |
Author |
Time |
Doi |
Literatures on RNA binding capacity
Pubmed ID |
Title |
Author |
Time |
Journal |
Name |
Transcript ID |
bp |
Protein |
Translation ID |
Srrm3-004 |
MGP_129S1SvImJ_T0074975 |
1896 |
No protein |
- |
- |
MGP_129S1SvImJ_T0074976 |
526 |
124aa |
MGP_129S1SvImJ_P0074976"/note="transcript_id=MGP_129S1SvImJ_T0074976 |
- |
MGP_129S1SvImJ_T0074977 |
2289 |
342aa |
MGP_129S1SvImJ_P0074977"/note="transcript_id=MGP_129S1SvImJ_T0074977 |
- |
MGP_129S1SvImJ_T0074978 |
3932 |
648aa |
MGP_129S1SvImJ_P0074978"/note="transcript_id=MGP_129S1SvImJ_T0074978 |
- |
MGP_129S1SvImJ_T0074979 |
681 |
No protein |
- |
- |
MGP_129S1SvImJ_T0074980 |
567 |
No protein |
- |
Pathway ID |
Pathway Name |
Source |
| | |
ensgID |
Trait |
pValue |
Pubmed ID |
ensgID | SNP | Chromosome | Position |
Trait | PubmedID | Or or BEAT |
EFO ID |
Protein-Protein Interaction (PPI)
Ensembl ID |
Source |
Target |
Species |
Protein ID |
Perc_pos |
Perc_id |
Species |
Protein ID |
Perc_pos |
Perc_id |
MGP_129S1SvImJ_G0030191 | | | | | | | | |
Ensembl ID |
Source |
Target |
Species |
Protein ID |
Perc_pos |
Perc_id |
Species |
Protein ID |
Perc_pos |
Perc_id |
MGP_129S1SvImJ_G0030191 | mus_musculus_129s1svimj | MGP_129S1SvImJ_P0074978 | 52.3148 | 51.8519 | mus_caroli | MGP_CAROLIEiJ_P0071368 | 99.1228 | 98.2456 |
MGP_129S1SvImJ_G0030191 | mus_musculus_129s1svimj | MGP_129S1SvImJ_P0074978 | 100 | 100 | mus_musculus_cbaj | MGP_CBAJ_P0074582 | 100 | 100 |
MGP_129S1SvImJ_G0030191 | mus_musculus_129s1svimj | MGP_129S1SvImJ_P0074978 | 100 | 100 | mus_musculus_c3hhej | MGP_C3HHeJ_P0074633 | 100 | 100 |
MGP_129S1SvImJ_G0030191 | mus_musculus_129s1svimj | MGP_129S1SvImJ_P0074978 | 100 | 100 | mus_musculus_akrj | MGP_AKRJ_P0074963 | 100 | 100 |
MGP_129S1SvImJ_G0030191 | mus_musculus_129s1svimj | MGP_129S1SvImJ_P0074978 | 99.537 | 99.537 | mus_musculus_casteij | MGP_CASTEiJ_P0075185 | 99.6909 | 99.6909 |
MGP_129S1SvImJ_G0030191 | mus_musculus_129s1svimj | MGP_129S1SvImJ_P0074978 | 100 | 100 | mus_musculus_nodshiltj | MGP_NODShiLtJ_P0074632 | 100 | 100 |
MGP_129S1SvImJ_G0030191 | mus_musculus_129s1svimj | MGP_129S1SvImJ_P0074978 | 100 | 100 | mus_musculus_fvbnj | MGP_FVBNJ_P0074630 | 100 | 100 |
MGP_129S1SvImJ_G0030191 | mus_musculus_129s1svimj | MGP_129S1SvImJ_P0074978 | 99.6914 | 99.6914 | mus_spretus | MGP_SPRETEiJ_P0074119 | 99.6914 | 99.6914 |
MGP_129S1SvImJ_G0030191 | mus_musculus_129s1svimj | MGP_129S1SvImJ_P0074978 | 100 | 100 | mus_musculus_wsbeij | MGP_WSBEiJ_P0073763 | 100 | 100 |
MGP_129S1SvImJ_G0030191 | mus_musculus_129s1svimj | MGP_129S1SvImJ_P0074978 | 100 | 100 | mus_musculus_dba2j | MGP_DBA2J_P0074729 | 100 | 100 |
MGP_129S1SvImJ_G0030191 | mus_musculus_129s1svimj | MGP_129S1SvImJ_P0074978 | 100 | 100 | mus_musculus_balbcj | MGP_BALBcJ_P0075005 | 100 | 100 |
MGP_129S1SvImJ_G0030191 | mus_musculus_129s1svimj | MGP_129S1SvImJ_P0074978 | 100 | 100 | mus_musculus_nzohlltj | MGP_NZOHlLtJ_P0075711 | 100 | 100 |
MGP_129S1SvImJ_G0030191 | mus_musculus_129s1svimj | MGP_129S1SvImJ_P0074978 | 100 | 100 | mus_musculus_aj | MGP_AJ_P0075061 | 100 | 100 |
MGP_129S1SvImJ_G0030191 | mus_musculus_129s1svimj | MGP_129S1SvImJ_P0074978 | 99.537 | 99.2284 | mus_pahari | MGP_PahariEiJ_P0059599 | 99.537 | 99.2284 |
MGP_129S1SvImJ_G0030191 | mus_musculus_129s1svimj | MGP_129S1SvImJ_P0074978 | 97.9938 | 96.9136 | rattus_norvegicus | ENSRNOP00000001957 | 97.9938 | 96.9136 |
MGP_129S1SvImJ_G0030191 | mus_musculus_129s1svimj | MGP_129S1SvImJ_P0074978 | 100 | 100 | mus_musculus | ENSMUSP00000115695 | 100 | 100 |
MGP_129S1SvImJ_G0030191 | mus_musculus_129s1svimj | MGP_129S1SvImJ_P0074978 | 100 | 100 | mus_musculus_c57bl6nj | MGP_C57BL6NJ_P0075474 | 100 | 100 |
MGP_129S1SvImJ_G0030191 | mus_musculus_129s1svimj | MGP_129S1SvImJ_P0074978 | 99.8457 | 99.8457 | mus_musculus_pwkphj | MGP_PWKPhJ_P0074645 | 99.8457 | 99.8457 |
MGP_129S1SvImJ_G0030191 | mus_musculus_129s1svimj | MGP_129S1SvImJ_P0074978 | 100 | 99.8457 | mus_spicilegus | ENSMSIP00000014184 | 100 | 99.8457 |
MGP_129S1SvImJ_G0030191 | mus_musculus_129s1svimj | MGP_129S1SvImJ_P0074978 | 100 | 100 | mus_musculus_lpj | MGP_LPJ_P0074785 | 100 | 100 |
Go ID |
Go term |
No. evidence |
Entries |
Species |
Category |