Description

Ensembl ID MGP_129S1SvImJ_G0028850 Gene ID Accession -
Symbol Zcchc17 Alias - Full Name zinc finger, CCHC domain containing 17
Status Confidence Length 43975 bases Strand Minus strand
Position 4 : 132321918 - 132365892 RNA binding domain S1
Summary N.A.

RNA binding domains (RBDs)

Protein Domain Pfam ID E-value Domain number
MGP_129S1SvImJ_P0068148 S1 PF00575 8e-10 1

RNA binding proteomes (RBPomes)

Pubmed ID Full Name Cell Author Time Doi

Literatures on RNA binding capacity

Pubmed ID Title Author Time Journal

Transcripts

Name Transcript ID bp Protein Translation ID
Zcchc17-001 MGP_129S1SvImJ_T0068148 2113 241aa MGP_129S1SvImJ_P0068148"/note="transcript_id=MGP_129S1SvImJ_T0068148
- MGP_129S1SvImJ_T0068149 762 No protein -
- MGP_129S1SvImJ_T0068150 708 No protein -
- MGP_129S1SvImJ_T0068151 286 No protein -
- MGP_129S1SvImJ_T0068152 2130 No protein -

Pathways

Pathway ID Pathway Name Source

Phenotypes

ensgID Trait pValue Pubmed ID

GWAS

ensgIDSNPChromosomePosition TraitPubmedIDOr or BEAT EFO ID

Paralogs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
MGP_129S1SvImJ_G0028850

Orthologs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
MGP_129S1SvImJ_G0028850mus_musculus_129s1svimjMGP_129S1SvImJ_P0068148100100mus_caroliMGP_CAROLIEiJ_P0064739100100
MGP_129S1SvImJ_G0028850mus_musculus_129s1svimjMGP_129S1SvImJ_P0068148100100mus_musculus_cbajMGP_CBAJ_P0067742100100
MGP_129S1SvImJ_G0028850mus_musculus_129s1svimjMGP_129S1SvImJ_P0068148100100mus_musculus_c3hhejMGP_C3HHeJ_P0067796100100
MGP_129S1SvImJ_G0028850mus_musculus_129s1svimjMGP_129S1SvImJ_P0068148100100mus_musculus_akrjMGP_AKRJ_P0068116100100
MGP_129S1SvImJ_G0028850mus_musculus_129s1svimjMGP_129S1SvImJ_P0068148100100mus_musculus_casteijMGP_CASTEiJ_P0068232100100
MGP_129S1SvImJ_G0028850mus_musculus_129s1svimjMGP_129S1SvImJ_P0068148100100mus_musculus_nodshiltjMGP_NODShiLtJ_P0067791100100
MGP_129S1SvImJ_G0028850mus_musculus_129s1svimjMGP_129S1SvImJ_P0068148100100mus_musculus_fvbnjMGP_FVBNJ_P0067786100100
MGP_129S1SvImJ_G0028850mus_musculus_129s1svimjMGP_129S1SvImJ_P006814899.585199.5851mus_spretusMGP_SPRETEiJ_P006725799.585199.5851
MGP_129S1SvImJ_G0028850mus_musculus_129s1svimjMGP_129S1SvImJ_P0068148100100mus_musculus_wsbeijMGP_WSBEiJ_P0066981100100
MGP_129S1SvImJ_G0028850mus_musculus_129s1svimjMGP_129S1SvImJ_P0068148100100mus_musculus_dba2jMGP_DBA2J_P0067875100100
MGP_129S1SvImJ_G0028850mus_musculus_129s1svimjMGP_129S1SvImJ_P0068148100100mus_musculus_balbcjMGP_BALBcJ_P0068127100100
MGP_129S1SvImJ_G0028850mus_musculus_129s1svimjMGP_129S1SvImJ_P0068148100100mus_musculus_nzohlltjMGP_NZOHlLtJ_P0068799100100
MGP_129S1SvImJ_G0028850mus_musculus_129s1svimjMGP_129S1SvImJ_P0068148100100mus_musculus_ajMGP_AJ_P0068205100100
MGP_129S1SvImJ_G0028850mus_musculus_129s1svimjMGP_129S1SvImJ_P006814899.585199.5851mus_pahariMGP_PahariEiJ_P007982599.585199.5851
MGP_129S1SvImJ_G0028850mus_musculus_129s1svimjMGP_129S1SvImJ_P006814899.170197.5104rattus_norvegicusENSRNOP0000001715699.170197.5104
MGP_129S1SvImJ_G0028850mus_musculus_129s1svimjMGP_129S1SvImJ_P0068148100100mus_musculusENSMUSP00000120807100100
MGP_129S1SvImJ_G0028850mus_musculus_129s1svimjMGP_129S1SvImJ_P0068148100100mus_musculus_c57bl6njMGP_C57BL6NJ_P0068617100100
MGP_129S1SvImJ_G0028850mus_musculus_129s1svimjMGP_129S1SvImJ_P0068148100100mus_musculus_pwkphjMGP_PWKPhJ_P0067740100100
MGP_129S1SvImJ_G0028850mus_musculus_129s1svimjMGP_129S1SvImJ_P0068148100100mus_spicilegusENSMSIP00000038282100100
MGP_129S1SvImJ_G0028850mus_musculus_129s1svimjMGP_129S1SvImJ_P0068148100100mus_musculus_lpjMGP_LPJ_P0067971100100

Gene Ontology

Go ID Go term No. evidence Entries Species Category

Expression