RBP Type |
N.A. |
Diseases |
|
Drug |
|
Main interacting RNAs |
|
Moonlighting functions |
|
Localizations |
|
BulkPerturb-seq
|
|
Ensembl ID | MGP_129S1SvImJ_G0028850 | Gene ID |
|
Accession |
- |
Symbol |
Zcchc17 |
Alias |
- |
Full Name |
zinc finger, CCHC domain containing 17 |
Status |
Confidence |
Length |
43975 bases |
Strand |
Minus strand |
Position |
4 : 132321918 - 132365892 |
RNA binding domain |
S1 |
Summary |
N.A. |
RNA binding domains (RBDs)
Protein |
Domain |
Pfam ID |
E-value |
Domain number |
MGP_129S1SvImJ_P0068148 |
S1 |
PF00575 |
8e-10 |
1 |
RNA binding proteomes (RBPomes)
Pubmed ID |
Full Name |
Cell |
Author |
Time |
Doi |
Literatures on RNA binding capacity
Pubmed ID |
Title |
Author |
Time |
Journal |
Name |
Transcript ID |
bp |
Protein |
Translation ID |
Zcchc17-001 |
MGP_129S1SvImJ_T0068148 |
2113 |
241aa |
MGP_129S1SvImJ_P0068148"/note="transcript_id=MGP_129S1SvImJ_T0068148 |
- |
MGP_129S1SvImJ_T0068149 |
762 |
No protein |
- |
- |
MGP_129S1SvImJ_T0068150 |
708 |
No protein |
- |
- |
MGP_129S1SvImJ_T0068151 |
286 |
No protein |
- |
- |
MGP_129S1SvImJ_T0068152 |
2130 |
No protein |
- |
Pathway ID |
Pathway Name |
Source |
| | |
ensgID |
Trait |
pValue |
Pubmed ID |
ensgID | SNP | Chromosome | Position |
Trait | PubmedID | Or or BEAT |
EFO ID |
Protein-Protein Interaction (PPI)
Ensembl ID |
Source |
Target |
Species |
Protein ID |
Perc_pos |
Perc_id |
Species |
Protein ID |
Perc_pos |
Perc_id |
MGP_129S1SvImJ_G0028850 | | | | | | | | |
Ensembl ID |
Source |
Target |
Species |
Protein ID |
Perc_pos |
Perc_id |
Species |
Protein ID |
Perc_pos |
Perc_id |
MGP_129S1SvImJ_G0028850 | mus_musculus_129s1svimj | MGP_129S1SvImJ_P0068148 | 100 | 100 | mus_caroli | MGP_CAROLIEiJ_P0064739 | 100 | 100 |
MGP_129S1SvImJ_G0028850 | mus_musculus_129s1svimj | MGP_129S1SvImJ_P0068148 | 100 | 100 | mus_musculus_cbaj | MGP_CBAJ_P0067742 | 100 | 100 |
MGP_129S1SvImJ_G0028850 | mus_musculus_129s1svimj | MGP_129S1SvImJ_P0068148 | 100 | 100 | mus_musculus_c3hhej | MGP_C3HHeJ_P0067796 | 100 | 100 |
MGP_129S1SvImJ_G0028850 | mus_musculus_129s1svimj | MGP_129S1SvImJ_P0068148 | 100 | 100 | mus_musculus_akrj | MGP_AKRJ_P0068116 | 100 | 100 |
MGP_129S1SvImJ_G0028850 | mus_musculus_129s1svimj | MGP_129S1SvImJ_P0068148 | 100 | 100 | mus_musculus_casteij | MGP_CASTEiJ_P0068232 | 100 | 100 |
MGP_129S1SvImJ_G0028850 | mus_musculus_129s1svimj | MGP_129S1SvImJ_P0068148 | 100 | 100 | mus_musculus_nodshiltj | MGP_NODShiLtJ_P0067791 | 100 | 100 |
MGP_129S1SvImJ_G0028850 | mus_musculus_129s1svimj | MGP_129S1SvImJ_P0068148 | 100 | 100 | mus_musculus_fvbnj | MGP_FVBNJ_P0067786 | 100 | 100 |
MGP_129S1SvImJ_G0028850 | mus_musculus_129s1svimj | MGP_129S1SvImJ_P0068148 | 99.5851 | 99.5851 | mus_spretus | MGP_SPRETEiJ_P0067257 | 99.5851 | 99.5851 |
MGP_129S1SvImJ_G0028850 | mus_musculus_129s1svimj | MGP_129S1SvImJ_P0068148 | 100 | 100 | mus_musculus_wsbeij | MGP_WSBEiJ_P0066981 | 100 | 100 |
MGP_129S1SvImJ_G0028850 | mus_musculus_129s1svimj | MGP_129S1SvImJ_P0068148 | 100 | 100 | mus_musculus_dba2j | MGP_DBA2J_P0067875 | 100 | 100 |
MGP_129S1SvImJ_G0028850 | mus_musculus_129s1svimj | MGP_129S1SvImJ_P0068148 | 100 | 100 | mus_musculus_balbcj | MGP_BALBcJ_P0068127 | 100 | 100 |
MGP_129S1SvImJ_G0028850 | mus_musculus_129s1svimj | MGP_129S1SvImJ_P0068148 | 100 | 100 | mus_musculus_nzohlltj | MGP_NZOHlLtJ_P0068799 | 100 | 100 |
MGP_129S1SvImJ_G0028850 | mus_musculus_129s1svimj | MGP_129S1SvImJ_P0068148 | 100 | 100 | mus_musculus_aj | MGP_AJ_P0068205 | 100 | 100 |
MGP_129S1SvImJ_G0028850 | mus_musculus_129s1svimj | MGP_129S1SvImJ_P0068148 | 99.5851 | 99.5851 | mus_pahari | MGP_PahariEiJ_P0079825 | 99.5851 | 99.5851 |
MGP_129S1SvImJ_G0028850 | mus_musculus_129s1svimj | MGP_129S1SvImJ_P0068148 | 99.1701 | 97.5104 | rattus_norvegicus | ENSRNOP00000017156 | 99.1701 | 97.5104 |
MGP_129S1SvImJ_G0028850 | mus_musculus_129s1svimj | MGP_129S1SvImJ_P0068148 | 100 | 100 | mus_musculus | ENSMUSP00000120807 | 100 | 100 |
MGP_129S1SvImJ_G0028850 | mus_musculus_129s1svimj | MGP_129S1SvImJ_P0068148 | 100 | 100 | mus_musculus_c57bl6nj | MGP_C57BL6NJ_P0068617 | 100 | 100 |
MGP_129S1SvImJ_G0028850 | mus_musculus_129s1svimj | MGP_129S1SvImJ_P0068148 | 100 | 100 | mus_musculus_pwkphj | MGP_PWKPhJ_P0067740 | 100 | 100 |
MGP_129S1SvImJ_G0028850 | mus_musculus_129s1svimj | MGP_129S1SvImJ_P0068148 | 100 | 100 | mus_spicilegus | ENSMSIP00000038282 | 100 | 100 |
MGP_129S1SvImJ_G0028850 | mus_musculus_129s1svimj | MGP_129S1SvImJ_P0068148 | 100 | 100 | mus_musculus_lpj | MGP_LPJ_P0067971 | 100 | 100 |
Go ID |
Go term |
No. evidence |
Entries |
Species |
Category |