Description

Ensembl ID MGP_129S1SvImJ_G0025223 Gene ID Accession -
Symbol Pdcd11 Alias - Full Name programmed cell death 11
Status Confidence Length 40966 bases Strand Plus strand
Position 19 : 46867702 - 46908667 RNA binding domain Suf , S1
Summary N.A.

RNA binding domains (RBDs)

Protein Domain Pfam ID E-value Domain number
MGP_129S1SvImJ_P0052052 Suf PF05843 2.9e-09 1
MGP_129S1SvImJ_P0052052 S1 PF00575 6.9e-63 2
MGP_129S1SvImJ_P0052052 S1 PF00575 6.9e-63 3
MGP_129S1SvImJ_P0052052 S1 PF00575 6.9e-63 4
MGP_129S1SvImJ_P0052052 S1 PF00575 6.9e-63 5

RNA binding proteomes (RBPomes)

Pubmed ID Full Name Cell Author Time Doi

Literatures on RNA binding capacity

Pubmed ID Title Author Time Journal

Transcripts

Name Transcript ID bp Protein Translation ID
Pdcd11-201 MGP_129S1SvImJ_T0052052 6035 1860aa MGP_129S1SvImJ_P0052052"/note="transcript_id=MGP_129S1SvImJ_T0052052

Pathways

Pathway ID Pathway Name Source

Phenotypes

ensgID Trait pValue Pubmed ID

GWAS

ensgIDSNPChromosomePosition TraitPubmedIDOr or BEAT EFO ID

Paralogs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
MGP_129S1SvImJ_G0025223

Orthologs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
MGP_129S1SvImJ_G0025223mus_musculus_129s1svimjMGP_129S1SvImJ_P005205298.225897.2043mus_caroliMGP_CAROLIEiJ_P004906698.490697.4663
MGP_129S1SvImJ_G0025223mus_musculus_129s1svimjMGP_129S1SvImJ_P005205299.892599.7849mus_musculus_cbajMGP_CBAJ_P005168899.892599.7849
MGP_129S1SvImJ_G0025223mus_musculus_129s1svimjMGP_129S1SvImJ_P005205299.892599.7849mus_musculus_c3hhejMGP_C3HHeJ_P005174199.892599.7849
MGP_129S1SvImJ_G0025223mus_musculus_129s1svimjMGP_129S1SvImJ_P005205299.892599.7849mus_musculus_akrjMGP_AKRJ_P005200999.892599.7849
MGP_129S1SvImJ_G0025223mus_musculus_129s1svimjMGP_129S1SvImJ_P005205299.623799.5699mus_musculus_casteijMGP_CASTEiJ_P005188499.677299.6235
MGP_129S1SvImJ_G0025223mus_musculus_129s1svimjMGP_129S1SvImJ_P005205299.892599.7849mus_musculus_nodshiltjMGP_NODShiLtJ_P005174299.892599.7849
MGP_129S1SvImJ_G0025223mus_musculus_129s1svimjMGP_129S1SvImJ_P005205299.892599.7849mus_musculus_fvbnjMGP_FVBNJ_P005174699.892599.7849
MGP_129S1SvImJ_G0025223mus_musculus_129s1svimjMGP_129S1SvImJ_P005205299.354899.1398mus_spretusMGP_SPRETEiJ_P005107699.354899.1398
MGP_129S1SvImJ_G0025223mus_musculus_129s1svimjMGP_129S1SvImJ_P005205299.892599.7849mus_musculus_wsbeijMGP_WSBEiJ_P005102399.892599.7849
MGP_129S1SvImJ_G0025223mus_musculus_129s1svimjMGP_129S1SvImJ_P005205299.946299.8387mus_musculus_dba2jMGP_DBA2J_P005179199.946299.8387
MGP_129S1SvImJ_G0025223mus_musculus_129s1svimjMGP_129S1SvImJ_P005205299.946299.8387mus_musculus_balbcjMGP_BALBcJ_P005200899.946299.8387
MGP_129S1SvImJ_G0025223mus_musculus_129s1svimjMGP_129S1SvImJ_P005205299.892599.7849mus_musculus_nzohlltjMGP_NZOHlLtJ_P005262599.892599.7849
MGP_129S1SvImJ_G0025223mus_musculus_129s1svimjMGP_129S1SvImJ_P005205299.946299.8387mus_musculus_ajMGP_AJ_P005206099.946299.8387
MGP_129S1SvImJ_G0025223mus_musculus_129s1svimjMGP_129S1SvImJ_P005205297.150594.5161mus_pahariMGP_PahariEiJ_P002203296.734594.1114
MGP_129S1SvImJ_G0025223mus_musculus_129s1svimjMGP_129S1SvImJ_P005205295.430190.8602rattus_norvegicusENSRNOP0000002751294.565890.0373
MGP_129S1SvImJ_G0025223mus_musculus_129s1svimjMGP_129S1SvImJ_P005205299.892599.7849mus_musculusENSMUSP0000007200899.785299.6778
MGP_129S1SvImJ_G0025223mus_musculus_129s1svimjMGP_129S1SvImJ_P005205299.892599.7849mus_musculus_c57bl6njMGP_C57BL6NJ_P005249799.785299.6778
MGP_129S1SvImJ_G0025223mus_musculus_129s1svimjMGP_129S1SvImJ_P005205299.623799.3548mus_musculus_pwkphjMGP_PWKPhJ_P005149199.570199.3015
MGP_129S1SvImJ_G0025223mus_musculus_129s1svimjMGP_129S1SvImJ_P005205299.462499.086mus_spicilegusENSMSIP0000003779099.408999.0328
MGP_129S1SvImJ_G0025223mus_musculus_129s1svimjMGP_129S1SvImJ_P0052052100100mus_musculus_lpjMGP_LPJ_P0051908100100

Gene Ontology

Go ID Go term No. evidence Entries Species Category

Expression