RBP Type |
N.A. |
Diseases |
|
Drug |
|
Main interacting RNAs |
|
Moonlighting functions |
|
Localizations |
|
BulkPerturb-seq
|
|
Ensembl ID | MGP_129S1SvImJ_G0025223 | Gene ID |
|
Accession |
- |
Symbol |
Pdcd11 |
Alias |
- |
Full Name |
programmed cell death 11 |
Status |
Confidence |
Length |
40966 bases |
Strand |
Plus strand |
Position |
19 : 46867702 - 46908667 |
RNA binding domain |
Suf , S1 |
Summary |
N.A. |
RNA binding domains (RBDs)
Protein |
Domain |
Pfam ID |
E-value |
Domain number |
MGP_129S1SvImJ_P0052052 |
Suf |
PF05843 |
2.9e-09 |
1 |
MGP_129S1SvImJ_P0052052 |
S1 |
PF00575 |
6.9e-63 |
2 |
MGP_129S1SvImJ_P0052052 |
S1 |
PF00575 |
6.9e-63 |
3 |
MGP_129S1SvImJ_P0052052 |
S1 |
PF00575 |
6.9e-63 |
4 |
MGP_129S1SvImJ_P0052052 |
S1 |
PF00575 |
6.9e-63 |
5 |
RNA binding proteomes (RBPomes)
Pubmed ID |
Full Name |
Cell |
Author |
Time |
Doi |
Literatures on RNA binding capacity
Pubmed ID |
Title |
Author |
Time |
Journal |
Name |
Transcript ID |
bp |
Protein |
Translation ID |
Pdcd11-201 |
MGP_129S1SvImJ_T0052052 |
6035 |
1860aa |
MGP_129S1SvImJ_P0052052"/note="transcript_id=MGP_129S1SvImJ_T0052052 |
Pathway ID |
Pathway Name |
Source |
| | |
ensgID |
Trait |
pValue |
Pubmed ID |
ensgID | SNP | Chromosome | Position |
Trait | PubmedID | Or or BEAT |
EFO ID |
Protein-Protein Interaction (PPI)
Ensembl ID |
Source |
Target |
Species |
Protein ID |
Perc_pos |
Perc_id |
Species |
Protein ID |
Perc_pos |
Perc_id |
MGP_129S1SvImJ_G0025223 | | | | | | | | |
Ensembl ID |
Source |
Target |
Species |
Protein ID |
Perc_pos |
Perc_id |
Species |
Protein ID |
Perc_pos |
Perc_id |
MGP_129S1SvImJ_G0025223 | mus_musculus_129s1svimj | MGP_129S1SvImJ_P0052052 | 98.2258 | 97.2043 | mus_caroli | MGP_CAROLIEiJ_P0049066 | 98.4906 | 97.4663 |
MGP_129S1SvImJ_G0025223 | mus_musculus_129s1svimj | MGP_129S1SvImJ_P0052052 | 99.8925 | 99.7849 | mus_musculus_cbaj | MGP_CBAJ_P0051688 | 99.8925 | 99.7849 |
MGP_129S1SvImJ_G0025223 | mus_musculus_129s1svimj | MGP_129S1SvImJ_P0052052 | 99.8925 | 99.7849 | mus_musculus_c3hhej | MGP_C3HHeJ_P0051741 | 99.8925 | 99.7849 |
MGP_129S1SvImJ_G0025223 | mus_musculus_129s1svimj | MGP_129S1SvImJ_P0052052 | 99.8925 | 99.7849 | mus_musculus_akrj | MGP_AKRJ_P0052009 | 99.8925 | 99.7849 |
MGP_129S1SvImJ_G0025223 | mus_musculus_129s1svimj | MGP_129S1SvImJ_P0052052 | 99.6237 | 99.5699 | mus_musculus_casteij | MGP_CASTEiJ_P0051884 | 99.6772 | 99.6235 |
MGP_129S1SvImJ_G0025223 | mus_musculus_129s1svimj | MGP_129S1SvImJ_P0052052 | 99.8925 | 99.7849 | mus_musculus_nodshiltj | MGP_NODShiLtJ_P0051742 | 99.8925 | 99.7849 |
MGP_129S1SvImJ_G0025223 | mus_musculus_129s1svimj | MGP_129S1SvImJ_P0052052 | 99.8925 | 99.7849 | mus_musculus_fvbnj | MGP_FVBNJ_P0051746 | 99.8925 | 99.7849 |
MGP_129S1SvImJ_G0025223 | mus_musculus_129s1svimj | MGP_129S1SvImJ_P0052052 | 99.3548 | 99.1398 | mus_spretus | MGP_SPRETEiJ_P0051076 | 99.3548 | 99.1398 |
MGP_129S1SvImJ_G0025223 | mus_musculus_129s1svimj | MGP_129S1SvImJ_P0052052 | 99.8925 | 99.7849 | mus_musculus_wsbeij | MGP_WSBEiJ_P0051023 | 99.8925 | 99.7849 |
MGP_129S1SvImJ_G0025223 | mus_musculus_129s1svimj | MGP_129S1SvImJ_P0052052 | 99.9462 | 99.8387 | mus_musculus_dba2j | MGP_DBA2J_P0051791 | 99.9462 | 99.8387 |
MGP_129S1SvImJ_G0025223 | mus_musculus_129s1svimj | MGP_129S1SvImJ_P0052052 | 99.9462 | 99.8387 | mus_musculus_balbcj | MGP_BALBcJ_P0052008 | 99.9462 | 99.8387 |
MGP_129S1SvImJ_G0025223 | mus_musculus_129s1svimj | MGP_129S1SvImJ_P0052052 | 99.8925 | 99.7849 | mus_musculus_nzohlltj | MGP_NZOHlLtJ_P0052625 | 99.8925 | 99.7849 |
MGP_129S1SvImJ_G0025223 | mus_musculus_129s1svimj | MGP_129S1SvImJ_P0052052 | 99.9462 | 99.8387 | mus_musculus_aj | MGP_AJ_P0052060 | 99.9462 | 99.8387 |
MGP_129S1SvImJ_G0025223 | mus_musculus_129s1svimj | MGP_129S1SvImJ_P0052052 | 97.1505 | 94.5161 | mus_pahari | MGP_PahariEiJ_P0022032 | 96.7345 | 94.1114 |
MGP_129S1SvImJ_G0025223 | mus_musculus_129s1svimj | MGP_129S1SvImJ_P0052052 | 95.4301 | 90.8602 | rattus_norvegicus | ENSRNOP00000027512 | 94.5658 | 90.0373 |
MGP_129S1SvImJ_G0025223 | mus_musculus_129s1svimj | MGP_129S1SvImJ_P0052052 | 99.8925 | 99.7849 | mus_musculus | ENSMUSP00000072008 | 99.7852 | 99.6778 |
MGP_129S1SvImJ_G0025223 | mus_musculus_129s1svimj | MGP_129S1SvImJ_P0052052 | 99.8925 | 99.7849 | mus_musculus_c57bl6nj | MGP_C57BL6NJ_P0052497 | 99.7852 | 99.6778 |
MGP_129S1SvImJ_G0025223 | mus_musculus_129s1svimj | MGP_129S1SvImJ_P0052052 | 99.6237 | 99.3548 | mus_musculus_pwkphj | MGP_PWKPhJ_P0051491 | 99.5701 | 99.3015 |
MGP_129S1SvImJ_G0025223 | mus_musculus_129s1svimj | MGP_129S1SvImJ_P0052052 | 99.4624 | 99.086 | mus_spicilegus | ENSMSIP00000037790 | 99.4089 | 99.0328 |
MGP_129S1SvImJ_G0025223 | mus_musculus_129s1svimj | MGP_129S1SvImJ_P0052052 | 100 | 100 | mus_musculus_lpj | MGP_LPJ_P0051908 | 100 | 100 |
Go ID |
Go term |
No. evidence |
Entries |
Species |
Category |