RBP Type |
N.A. |
Diseases |
|
Drug |
|
Main interacting RNAs |
|
Moonlighting functions |
|
Localizations |
|
BulkPerturb-seq
|
|
Ensembl ID | MGP_129S1SvImJ_G0023272 | Gene ID |
|
Accession |
- |
Symbol |
Srrm2 |
Alias |
- |
Full Name |
serine/arginine repetitive matrix 2 |
Status |
Confidence |
Length |
40645 bases |
Strand |
Plus strand |
Position |
17 : 22709260 - 22749904 |
RNA binding domain |
cwf21 |
Summary |
N.A. |
RNA binding domains (RBDs)
Protein |
Domain |
Pfam ID |
E-value |
Domain number |
MGP_129S1SvImJ_P0045837 |
cwf21 |
PF08312 |
1.1e-10 |
1 |
MGP_129S1SvImJ_P0045838 |
cwf21 |
PF08312 |
4e-09 |
1 |
RNA binding proteomes (RBPomes)
Pubmed ID |
Full Name |
Cell |
Author |
Time |
Doi |
Literatures on RNA binding capacity
Pubmed ID |
Title |
Author |
Time |
Journal |
Name |
Transcript ID |
bp |
Protein |
Translation ID |
Srrm2-001 |
MGP_129S1SvImJ_T0045837 |
950 |
171aa |
MGP_129S1SvImJ_P0045837"/note="transcript_id=MGP_129S1SvImJ_T0045837 |
- |
MGP_129S1SvImJ_T0045838 |
8806 |
2703aa |
MGP_129S1SvImJ_P0045838"/note="transcript_id=MGP_129S1SvImJ_T0045838 |
- |
MGP_129S1SvImJ_T0045839 |
8506 |
2607aa |
MGP_129S1SvImJ_P0045839"/note="transcript_id=MGP_129S1SvImJ_T0045839 |
- |
MGP_129S1SvImJ_T0045840 |
459 |
88aa |
MGP_129S1SvImJ_P0045840"/note="transcript_id=MGP_129S1SvImJ_T0045840 |
- |
MGP_129S1SvImJ_T0045841 |
433 |
No protein |
- |
- |
MGP_129S1SvImJ_T0045842 |
494 |
33aa |
MGP_129S1SvImJ_P0045842"/note="transcript_id=MGP_129S1SvImJ_T0045842 |
- |
MGP_129S1SvImJ_T0045843 |
2091 |
No protein |
- |
- |
MGP_129S1SvImJ_T0045844 |
2991 |
No protein |
- |
- |
MGP_129S1SvImJ_T0045845 |
647 |
104aa |
MGP_129S1SvImJ_P0045845"/note="transcript_id=MGP_129S1SvImJ_T0045845 |
- |
MGP_129S1SvImJ_T0045846 |
582 |
No protein |
- |
Pathway ID |
Pathway Name |
Source |
| | |
ensgID |
Trait |
pValue |
Pubmed ID |
ensgID | SNP | Chromosome | Position |
Trait | PubmedID | Or or BEAT |
EFO ID |
Protein-Protein Interaction (PPI)
Ensembl ID |
Source |
Target |
Species |
Protein ID |
Perc_pos |
Perc_id |
Species |
Protein ID |
Perc_pos |
Perc_id |
MGP_129S1SvImJ_G0023272 | | | | | | | | |
Ensembl ID |
Source |
Target |
Species |
Protein ID |
Perc_pos |
Perc_id |
Species |
Protein ID |
Perc_pos |
Perc_id |
MGP_129S1SvImJ_G0023272 | mus_musculus_129s1svimj | MGP_129S1SvImJ_P0045838 | 99.5191 | 99.1491 | mus_caroli | MGP_CAROLIEiJ_P0042969 | 99.5559 | 99.1858 |
MGP_129S1SvImJ_G0023272 | mus_musculus_129s1svimj | MGP_129S1SvImJ_P0045838 | 99.926 | 99.926 | mus_musculus_cbaj | MGP_CBAJ_P0045444 | 99.926 | 99.926 |
MGP_129S1SvImJ_G0023272 | mus_musculus_129s1svimj | MGP_129S1SvImJ_P0045838 | 99.926 | 99.926 | mus_musculus_c3hhej | MGP_C3HHeJ_P0045518 | 99.926 | 99.926 |
MGP_129S1SvImJ_G0023272 | mus_musculus_129s1svimj | MGP_129S1SvImJ_P0045838 | 99.963 | 99.963 | mus_musculus_akrj | MGP_AKRJ_P0045773 | 99.963 | 99.963 |
MGP_129S1SvImJ_G0023272 | mus_musculus_129s1svimj | MGP_129S1SvImJ_P0045838 | 99.889 | 99.852 | mus_musculus_casteij | MGP_CASTEiJ_P0045629 | 99.889 | 99.852 |
MGP_129S1SvImJ_G0023272 | mus_musculus_129s1svimj | MGP_129S1SvImJ_P0045838 | 99.963 | 99.963 | mus_musculus_nodshiltj | MGP_NODShiLtJ_P0045511 | 99.963 | 99.963 |
MGP_129S1SvImJ_G0023272 | mus_musculus_129s1svimj | MGP_129S1SvImJ_P0045838 | 99.926 | 99.926 | mus_musculus_fvbnj | MGP_FVBNJ_P0045540 | 99.926 | 99.926 |
MGP_129S1SvImJ_G0023272 | mus_musculus_129s1svimj | MGP_129S1SvImJ_P0045838 | 99.852 | 99.704 | mus_spretus | MGP_SPRETEiJ_P0044869 | 99.852 | 99.704 |
MGP_129S1SvImJ_G0023272 | mus_musculus_129s1svimj | MGP_129S1SvImJ_P0045838 | 100 | 100 | mus_musculus_wsbeij | MGP_WSBEiJ_P0044900 | 100 | 100 |
MGP_129S1SvImJ_G0023272 | mus_musculus_129s1svimj | MGP_129S1SvImJ_P0045838 | 100 | 100 | mus_musculus_dba2j | MGP_DBA2J_P0045576 | 100 | 100 |
MGP_129S1SvImJ_G0023272 | mus_musculus_129s1svimj | MGP_129S1SvImJ_P0045838 | 100 | 100 | mus_musculus_balbcj | MGP_BALBcJ_P0045781 | 100 | 100 |
MGP_129S1SvImJ_G0023272 | mus_musculus_129s1svimj | MGP_129S1SvImJ_P0045838 | 100 | 100 | mus_musculus_nzohlltj | MGP_NZOHlLtJ_P0046355 | 100 | 100 |
MGP_129S1SvImJ_G0023272 | mus_musculus_129s1svimj | MGP_129S1SvImJ_P0045838 | 100 | 100 | mus_musculus_aj | MGP_AJ_P0045822 | 100 | 100 |
MGP_129S1SvImJ_G0023272 | mus_musculus_129s1svimj | MGP_129S1SvImJ_P0045838 | 98.6311 | 98.2242 | mus_pahari | MGP_PahariEiJ_P0055260 | 98.5582 | 98.1516 |
MGP_129S1SvImJ_G0023272 | mus_musculus_129s1svimj | MGP_129S1SvImJ_P0045838 | 95.9674 | 94.4876 | rattus_norvegicus | ENSRNOP00000086062 | 96.4671 | 94.9795 |
MGP_129S1SvImJ_G0023272 | mus_musculus_129s1svimj | MGP_129S1SvImJ_P0045838 | 99.815 | 99.778 | mus_musculus | ENSMUSP00000139842 | 99.815 | 99.778 |
MGP_129S1SvImJ_G0023272 | mus_musculus_129s1svimj | MGP_129S1SvImJ_P0045838 | 99.815 | 99.778 | mus_musculus_c57bl6nj | MGP_C57BL6NJ_P0046268 | 99.815 | 99.778 |
MGP_129S1SvImJ_G0023272 | mus_musculus_129s1svimj | MGP_129S1SvImJ_P0045838 | 99.815 | 99.778 | mus_musculus_pwkphj | MGP_PWKPhJ_P0045210 | 99.815 | 99.778 |
MGP_129S1SvImJ_G0023272 | mus_musculus_129s1svimj | MGP_129S1SvImJ_P0045838 | 99.704 | 99.667 | mus_spicilegus | ENSMSIP00000017152 | 99.4465 | 99.4096 |
MGP_129S1SvImJ_G0023272 | mus_musculus_129s1svimj | MGP_129S1SvImJ_P0045838 | 100 | 100 | mus_musculus_lpj | MGP_LPJ_P0045674 | 100 | 100 |
Go ID |
Go term |
No. evidence |
Entries |
Species |
Category |