Description

Ensembl ID MGP_129S1SvImJ_G0023272 Gene ID Accession -
Symbol Srrm2 Alias - Full Name serine/arginine repetitive matrix 2
Status Confidence Length 40645 bases Strand Plus strand
Position 17 : 22709260 - 22749904 RNA binding domain cwf21
Summary N.A.

RNA binding domains (RBDs)

Protein Domain Pfam ID E-value Domain number
MGP_129S1SvImJ_P0045837 cwf21 PF08312 1.1e-10 1
MGP_129S1SvImJ_P0045838 cwf21 PF08312 4e-09 1

RNA binding proteomes (RBPomes)

Pubmed ID Full Name Cell Author Time Doi

Literatures on RNA binding capacity

Pubmed ID Title Author Time Journal

Transcripts

Name Transcript ID bp Protein Translation ID
Srrm2-001 MGP_129S1SvImJ_T0045837 950 171aa MGP_129S1SvImJ_P0045837"/note="transcript_id=MGP_129S1SvImJ_T0045837
- MGP_129S1SvImJ_T0045838 8806 2703aa MGP_129S1SvImJ_P0045838"/note="transcript_id=MGP_129S1SvImJ_T0045838
- MGP_129S1SvImJ_T0045839 8506 2607aa MGP_129S1SvImJ_P0045839"/note="transcript_id=MGP_129S1SvImJ_T0045839
- MGP_129S1SvImJ_T0045840 459 88aa MGP_129S1SvImJ_P0045840"/note="transcript_id=MGP_129S1SvImJ_T0045840
- MGP_129S1SvImJ_T0045841 433 No protein -
- MGP_129S1SvImJ_T0045842 494 33aa MGP_129S1SvImJ_P0045842"/note="transcript_id=MGP_129S1SvImJ_T0045842
- MGP_129S1SvImJ_T0045843 2091 No protein -
- MGP_129S1SvImJ_T0045844 2991 No protein -
- MGP_129S1SvImJ_T0045845 647 104aa MGP_129S1SvImJ_P0045845"/note="transcript_id=MGP_129S1SvImJ_T0045845
- MGP_129S1SvImJ_T0045846 582 No protein -

Pathways

Pathway ID Pathway Name Source

Phenotypes

ensgID Trait pValue Pubmed ID

GWAS

ensgIDSNPChromosomePosition TraitPubmedIDOr or BEAT EFO ID

Paralogs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
MGP_129S1SvImJ_G0023272

Orthologs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
MGP_129S1SvImJ_G0023272mus_musculus_129s1svimjMGP_129S1SvImJ_P004583899.519199.1491mus_caroliMGP_CAROLIEiJ_P004296999.555999.1858
MGP_129S1SvImJ_G0023272mus_musculus_129s1svimjMGP_129S1SvImJ_P004583899.92699.926mus_musculus_cbajMGP_CBAJ_P004544499.92699.926
MGP_129S1SvImJ_G0023272mus_musculus_129s1svimjMGP_129S1SvImJ_P004583899.92699.926mus_musculus_c3hhejMGP_C3HHeJ_P004551899.92699.926
MGP_129S1SvImJ_G0023272mus_musculus_129s1svimjMGP_129S1SvImJ_P004583899.96399.963mus_musculus_akrjMGP_AKRJ_P004577399.96399.963
MGP_129S1SvImJ_G0023272mus_musculus_129s1svimjMGP_129S1SvImJ_P004583899.88999.852mus_musculus_casteijMGP_CASTEiJ_P004562999.88999.852
MGP_129S1SvImJ_G0023272mus_musculus_129s1svimjMGP_129S1SvImJ_P004583899.96399.963mus_musculus_nodshiltjMGP_NODShiLtJ_P004551199.96399.963
MGP_129S1SvImJ_G0023272mus_musculus_129s1svimjMGP_129S1SvImJ_P004583899.92699.926mus_musculus_fvbnjMGP_FVBNJ_P004554099.92699.926
MGP_129S1SvImJ_G0023272mus_musculus_129s1svimjMGP_129S1SvImJ_P004583899.85299.704mus_spretusMGP_SPRETEiJ_P004486999.85299.704
MGP_129S1SvImJ_G0023272mus_musculus_129s1svimjMGP_129S1SvImJ_P0045838100100mus_musculus_wsbeijMGP_WSBEiJ_P0044900100100
MGP_129S1SvImJ_G0023272mus_musculus_129s1svimjMGP_129S1SvImJ_P0045838100100mus_musculus_dba2jMGP_DBA2J_P0045576100100
MGP_129S1SvImJ_G0023272mus_musculus_129s1svimjMGP_129S1SvImJ_P0045838100100mus_musculus_balbcjMGP_BALBcJ_P0045781100100
MGP_129S1SvImJ_G0023272mus_musculus_129s1svimjMGP_129S1SvImJ_P0045838100100mus_musculus_nzohlltjMGP_NZOHlLtJ_P0046355100100
MGP_129S1SvImJ_G0023272mus_musculus_129s1svimjMGP_129S1SvImJ_P0045838100100mus_musculus_ajMGP_AJ_P0045822100100
MGP_129S1SvImJ_G0023272mus_musculus_129s1svimjMGP_129S1SvImJ_P004583898.631198.2242mus_pahariMGP_PahariEiJ_P005526098.558298.1516
MGP_129S1SvImJ_G0023272mus_musculus_129s1svimjMGP_129S1SvImJ_P004583895.967494.4876rattus_norvegicusENSRNOP0000008606296.467194.9795
MGP_129S1SvImJ_G0023272mus_musculus_129s1svimjMGP_129S1SvImJ_P004583899.81599.778mus_musculusENSMUSP0000013984299.81599.778
MGP_129S1SvImJ_G0023272mus_musculus_129s1svimjMGP_129S1SvImJ_P004583899.81599.778mus_musculus_c57bl6njMGP_C57BL6NJ_P004626899.81599.778
MGP_129S1SvImJ_G0023272mus_musculus_129s1svimjMGP_129S1SvImJ_P004583899.81599.778mus_musculus_pwkphjMGP_PWKPhJ_P004521099.81599.778
MGP_129S1SvImJ_G0023272mus_musculus_129s1svimjMGP_129S1SvImJ_P004583899.70499.667mus_spicilegusENSMSIP0000001715299.446599.4096
MGP_129S1SvImJ_G0023272mus_musculus_129s1svimjMGP_129S1SvImJ_P0045838100100mus_musculus_lpjMGP_LPJ_P0045674100100

Gene Ontology

Go ID Go term No. evidence Entries Species Category

Expression