Description

Ensembl ID MGP_129S1SvImJ_G0018103 Gene ID Accession -
Symbol Pnpt1 Alias - Full Name polyribonucleotide nucleotidyltransferase 1
Status Confidence Length 30947 bases Strand Plus strand
Position 11 : 27125198 - 27156144 RNA binding domain RNase_PH , RNase_PH_C , PNPase , KH_1 , S1
Summary N.A.

RNA binding domains (RBDs)

Protein Domain Pfam ID E-value Domain number
MGP_129S1SvImJ_P0028338 RNase_PH PF01138 2.9e-38 1
MGP_129S1SvImJ_P0028338 RNase_PH PF01138 2.9e-38 2
MGP_129S1SvImJ_P0028338 RNase_PH_C PF03725 2.1e-16 3
MGP_129S1SvImJ_P0028338 PNPase PF03726 5.6e-07 4
MGP_129S1SvImJ_P0028338 KH_1 PF00013 4.5e-07 5
MGP_129S1SvImJ_P0028338 S1 PF00575 1.3e-05 6

RNA binding proteomes (RBPomes)

Pubmed ID Full Name Cell Author Time Doi

Literatures on RNA binding capacity

Pubmed ID Title Author Time Journal

Transcripts

Name Transcript ID bp Protein Translation ID
Pnpt1-002 MGP_129S1SvImJ_T0028336 3325 No protein -
- MGP_129S1SvImJ_T0028337 459 No protein -
- MGP_129S1SvImJ_T0028338 2707 783aa MGP_129S1SvImJ_P0028338"/note="transcript_id=MGP_129S1SvImJ_T0028338
- MGP_129S1SvImJ_T0028339 587 No protein -

Pathways

Pathway ID Pathway Name Source

Phenotypes

ensgID Trait pValue Pubmed ID

GWAS

ensgIDSNPChromosomePosition TraitPubmedIDOr or BEAT EFO ID

Paralogs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
MGP_129S1SvImJ_G0018103

Orthologs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
MGP_129S1SvImJ_G0018103mus_musculus_129s1svimjMGP_129S1SvImJ_P002833899.489198.9783mus_caroliMGP_CAROLIEiJ_P002595999.362298.852
MGP_129S1SvImJ_G0018103mus_musculus_129s1svimjMGP_129S1SvImJ_P0028338100100mus_musculus_cbajMGP_CBAJ_P0028006100100
MGP_129S1SvImJ_G0018103mus_musculus_129s1svimjMGP_129S1SvImJ_P002833899.872399.8723mus_musculus_c3hhejMGP_C3HHeJ_P002808499.872399.8723
MGP_129S1SvImJ_G0018103mus_musculus_129s1svimjMGP_129S1SvImJ_P0028338100100mus_musculus_akrjMGP_AKRJ_P0028266100100
MGP_129S1SvImJ_G0018103mus_musculus_129s1svimjMGP_129S1SvImJ_P002833899.872399.8723mus_musculus_casteijMGP_CASTEiJ_P002771899.872399.8723
MGP_129S1SvImJ_G0018103mus_musculus_129s1svimjMGP_129S1SvImJ_P0028338100100mus_musculus_nodshiltjMGP_NODShiLtJ_P0028109100100
MGP_129S1SvImJ_G0018103mus_musculus_129s1svimjMGP_129S1SvImJ_P0028338100100mus_musculus_fvbnjMGP_FVBNJ_P0028123100100
MGP_129S1SvImJ_G0018103mus_musculus_129s1svimjMGP_129S1SvImJ_P002833899.616999.3614mus_spretusMGP_SPRETEiJ_P002729699.489899.2347
MGP_129S1SvImJ_G0018103mus_musculus_129s1svimjMGP_129S1SvImJ_P0028338100100mus_musculus_wsbeijMGP_WSBEiJ_P0027592100100
MGP_129S1SvImJ_G0018103mus_musculus_129s1svimjMGP_129S1SvImJ_P002833897.190397.1903mus_musculus_dba2jMGP_DBA2J_P002813797.190397.1903
MGP_129S1SvImJ_G0018103mus_musculus_129s1svimjMGP_129S1SvImJ_P0028338100100mus_musculus_balbcjMGP_BALBcJ_P0028281100100
MGP_129S1SvImJ_G0018103mus_musculus_129s1svimjMGP_129S1SvImJ_P002833899.872399.8723mus_musculus_nzohlltjMGP_NZOHlLtJ_P002881599.872399.8723
MGP_129S1SvImJ_G0018103mus_musculus_129s1svimjMGP_129S1SvImJ_P002833899.872399.8723mus_musculus_ajMGP_AJ_P002830399.872399.8723
MGP_129S1SvImJ_G0018103mus_musculus_129s1svimjMGP_129S1SvImJ_P002833899.10697.7011mus_pahariMGP_PahariEiJ_P002999398.979697.5765
MGP_129S1SvImJ_G0018103mus_musculus_129s1svimjMGP_129S1SvImJ_P002833898.21296.1686rattus_norvegicusENSRNOP0000000491998.086796.0459
MGP_129S1SvImJ_G0018103mus_musculus_129s1svimjMGP_129S1SvImJ_P0028338100100mus_musculusENSMUSP00000020756100100
MGP_129S1SvImJ_G0018103mus_musculus_129s1svimjMGP_129S1SvImJ_P0028338100100mus_musculus_c57bl6njMGP_C57BL6NJ_P0028781100100
MGP_129S1SvImJ_G0018103mus_musculus_129s1svimjMGP_129S1SvImJ_P002833897.573497.1903mus_musculus_pwkphjMGP_PWKPhJ_P002742698.453698.067
MGP_129S1SvImJ_G0018103mus_musculus_129s1svimjMGP_129S1SvImJ_P002833899.744699.6169mus_spicilegusENSMSIP0000002085699.617399.4898
MGP_129S1SvImJ_G0018103mus_musculus_129s1svimjMGP_129S1SvImJ_P0028338100100mus_musculus_lpjMGP_LPJ_P0028252100100

Gene Ontology

Go ID Go term No. evidence Entries Species Category

Expression