| RBP Type |
N.A. |
| Diseases |
|
| Drug |
|
| Main interacting RNAs |
|
| Moonlighting functions |
|
| Localizations |
|
|
BulkPerturb-seq
|
|
| Ensembl ID | MGP_129S1SvImJ_G0018085 | Gene ID |
|
Accession |
- |
| Symbol |
Xpo1 |
Alias |
- |
Full Name |
exportin 1 |
| Status |
Confidence |
Length |
51158 bases |
Strand |
Plus strand |
| Position |
11 : 20988899 - 21040056 |
RNA binding domain |
IBN_N , CRM1_C , Xpo1 |
| Summary |
N.A. |
RNA binding domains (RBDs)
| Protein |
Domain |
Pfam ID |
E-value |
Domain number |
| MGP_129S1SvImJ_P0028251 |
IBN_N |
PF03810 |
4.4e-12 |
1 |
| MGP_129S1SvImJ_P0028251 |
CRM1_C |
PF08767 |
3e-134 |
2 |
| MGP_129S1SvImJ_P0028251 |
Xpo1 |
PF08389 |
1.7e-41 |
3 |
| MGP_129S1SvImJ_P0028252 |
IBN_N |
PF03810 |
4.4e-12 |
1 |
| MGP_129S1SvImJ_P0028252 |
CRM1_C |
PF08767 |
3e-134 |
2 |
| MGP_129S1SvImJ_P0028252 |
Xpo1 |
PF08389 |
1.7e-41 |
3 |
| MGP_129S1SvImJ_P0028253 |
IBN_N |
PF03810 |
4.4e-12 |
1 |
| MGP_129S1SvImJ_P0028253 |
CRM1_C |
PF08767 |
3e-134 |
2 |
| MGP_129S1SvImJ_P0028253 |
Xpo1 |
PF08389 |
1.7e-41 |
3 |
| MGP_129S1SvImJ_P0028255 |
IBN_N |
PF03810 |
4.4e-12 |
1 |
| MGP_129S1SvImJ_P0028255 |
CRM1_C |
PF08767 |
3e-134 |
2 |
| MGP_129S1SvImJ_P0028255 |
Xpo1 |
PF08389 |
1.7e-41 |
3 |
| MGP_129S1SvImJ_P0028257 |
CRM1_C |
PF08767 |
3.4e-19 |
1 |
RNA binding proteomes (RBPomes)
| Pubmed ID |
Full Name |
Cell |
Author |
Time |
Doi |
Literatures on RNA binding capacity
| Pubmed ID |
Title |
Author |
Time |
Journal |
| Name |
Transcript ID |
bp |
Protein |
Translation ID |
| Xpo1-001 |
MGP_129S1SvImJ_T0028251 |
5145 |
1071aa |
MGP_129S1SvImJ_P0028251"/note="transcript_id=MGP_129S1SvImJ_T0028251 |
| - |
MGP_129S1SvImJ_T0028252 |
4906 |
1071aa |
MGP_129S1SvImJ_P0028252"/note="transcript_id=MGP_129S1SvImJ_T0028252 |
| - |
MGP_129S1SvImJ_T0028253 |
3471 |
1071aa |
MGP_129S1SvImJ_P0028253"/note="transcript_id=MGP_129S1SvImJ_T0028253 |
| - |
MGP_129S1SvImJ_T0028254 |
2902 |
No protein |
- |
| - |
MGP_129S1SvImJ_T0028255 |
6004 |
1071aa |
MGP_129S1SvImJ_P0028255"/note="transcript_id=MGP_129S1SvImJ_T0028255 |
| - |
MGP_129S1SvImJ_T0028256 |
463 |
59aa |
MGP_129S1SvImJ_P0028256"/note="transcript_id=MGP_129S1SvImJ_T0028256 |
| - |
MGP_129S1SvImJ_T0028257 |
698 |
232aa |
MGP_129S1SvImJ_P0028257"/note="transcript_id=MGP_129S1SvImJ_T0028257 |
| Pathway ID |
Pathway Name |
Source |
| | |
| ensgID |
Trait |
pValue |
Pubmed ID |
| ensgID | SNP | Chromosome | Position |
Trait | PubmedID | Or or BEAT |
EFO ID |
Protein-Protein Interaction (PPI)
| Ensembl ID |
Source |
Target |
| Species |
Protein ID |
Perc_pos |
Perc_id |
Species |
Protein ID |
Perc_pos |
Perc_id |
| MGP_129S1SvImJ_G0018085 | mus_musculus_129s1svimj | MGP_129S1SvImJ_P0047910 | 36.2957 | 17.0266 | mus_musculus_129s1svimj | MGP_129S1SvImJ_P0028255 | 40.803 | 19.141 |
| Ensembl ID |
Source |
Target |
| Species |
Protein ID |
Perc_pos |
Perc_id |
Species |
Protein ID |
Perc_pos |
Perc_id |
| MGP_129S1SvImJ_G0018085 | mus_musculus_129s1svimj | MGP_129S1SvImJ_P0028255 | 100 | 99.9066 | mus_caroli | MGP_CAROLIEiJ_P0025876 | 100 | 99.9066 |
| MGP_129S1SvImJ_G0018085 | mus_musculus_129s1svimj | MGP_129S1SvImJ_P0028255 | 100 | 100 | mus_musculus_cbaj | MGP_CBAJ_P0027926 | 100 | 100 |
| MGP_129S1SvImJ_G0018085 | mus_musculus_129s1svimj | MGP_129S1SvImJ_P0028255 | 100 | 100 | mus_musculus_c3hhej | MGP_C3HHeJ_P0028001 | 100 | 100 |
| MGP_129S1SvImJ_G0018085 | mus_musculus_129s1svimj | MGP_129S1SvImJ_P0028255 | 99.9066 | 99.9066 | mus_musculus_akrj | MGP_AKRJ_P0028184 | 99.9066 | 99.9066 |
| MGP_129S1SvImJ_G0018085 | mus_musculus_129s1svimj | MGP_129S1SvImJ_P0028255 | 100 | 100 | mus_musculus_casteij | MGP_CASTEiJ_P0027626 | 100 | 100 |
| MGP_129S1SvImJ_G0018085 | mus_musculus_129s1svimj | MGP_129S1SvImJ_P0028255 | 100 | 100 | mus_musculus_nodshiltj | MGP_NODShiLtJ_P0028026 | 100 | 100 |
| MGP_129S1SvImJ_G0018085 | mus_musculus_129s1svimj | MGP_129S1SvImJ_P0028255 | 100 | 100 | mus_musculus_fvbnj | MGP_FVBNJ_P0028044 | 100 | 100 |
| MGP_129S1SvImJ_G0018085 | mus_musculus_129s1svimj | MGP_129S1SvImJ_P0028255 | 100 | 100 | mus_spretus | MGP_SPRETEiJ_P0027211 | 100 | 100 |
| MGP_129S1SvImJ_G0018085 | mus_musculus_129s1svimj | MGP_129S1SvImJ_P0028255 | 100 | 100 | mus_musculus_wsbeij | MGP_WSBEiJ_P0027511 | 100 | 100 |
| MGP_129S1SvImJ_G0018085 | mus_musculus_129s1svimj | MGP_129S1SvImJ_P0028255 | 100 | 100 | mus_musculus_dba2j | MGP_DBA2J_P0028054 | 100 | 100 |
| MGP_129S1SvImJ_G0018085 | mus_musculus_129s1svimj | MGP_129S1SvImJ_P0028255 | 100 | 100 | mus_musculus_balbcj | MGP_BALBcJ_P0028200 | 100 | 100 |
| MGP_129S1SvImJ_G0018085 | mus_musculus_129s1svimj | MGP_129S1SvImJ_P0028255 | 100 | 100 | mus_musculus_nzohlltj | MGP_NZOHlLtJ_P0028732 | 100 | 100 |
| MGP_129S1SvImJ_G0018085 | mus_musculus_129s1svimj | MGP_129S1SvImJ_P0028255 | 100 | 100 | mus_musculus_aj | MGP_AJ_P0028220 | 100 | 100 |
| MGP_129S1SvImJ_G0018085 | mus_musculus_129s1svimj | MGP_129S1SvImJ_P0028255 | 99.9066 | 99.9066 | mus_pahari | MGP_PahariEiJ_P0030076 | 99.9066 | 99.9066 |
| MGP_129S1SvImJ_G0018085 | mus_musculus_129s1svimj | MGP_129S1SvImJ_P0028255 | 95.7983 | 95.6116 | rattus_norvegicus | ENSRNOP00000097648 | 100 | 99.8051 |
| MGP_129S1SvImJ_G0018085 | mus_musculus_129s1svimj | MGP_129S1SvImJ_P0028255 | 100 | 100 | mus_musculus | ENSMUSP00000099933 | 100 | 100 |
| MGP_129S1SvImJ_G0018085 | mus_musculus_129s1svimj | MGP_129S1SvImJ_P0028255 | 100 | 100 | mus_musculus_c57bl6nj | MGP_C57BL6NJ_P0028698 | 100 | 100 |
| MGP_129S1SvImJ_G0018085 | mus_musculus_129s1svimj | MGP_129S1SvImJ_P0028255 | 100 | 100 | mus_musculus_pwkphj | MGP_PWKPhJ_P0027328 | 100 | 100 |
| MGP_129S1SvImJ_G0018085 | mus_musculus_129s1svimj | MGP_129S1SvImJ_P0028255 | 100 | 100 | mus_spicilegus | ENSMSIP00000038214 | 100 | 100 |
| MGP_129S1SvImJ_G0018085 | mus_musculus_129s1svimj | MGP_129S1SvImJ_P0028255 | 100 | 100 | mus_musculus_lpj | MGP_LPJ_P0028167 | 100 | 100 |
| Go ID |
Go term |
No. evidence |
Entries |
Species |
Category |