Description

Ensembl ID MGP_129S1SvImJ_G0018085 Gene ID Accession -
Symbol Xpo1 Alias - Full Name exportin 1
Status Confidence Length 51158 bases Strand Plus strand
Position 11 : 20988899 - 21040056 RNA binding domain IBN_N , CRM1_C , Xpo1
Summary N.A.

RNA binding domains (RBDs)

Protein Domain Pfam ID E-value Domain number
MGP_129S1SvImJ_P0028251 IBN_N PF03810 4.4e-12 1
MGP_129S1SvImJ_P0028251 CRM1_C PF08767 3e-134 2
MGP_129S1SvImJ_P0028251 Xpo1 PF08389 1.7e-41 3
MGP_129S1SvImJ_P0028252 IBN_N PF03810 4.4e-12 1
MGP_129S1SvImJ_P0028252 CRM1_C PF08767 3e-134 2
MGP_129S1SvImJ_P0028252 Xpo1 PF08389 1.7e-41 3
MGP_129S1SvImJ_P0028253 IBN_N PF03810 4.4e-12 1
MGP_129S1SvImJ_P0028253 CRM1_C PF08767 3e-134 2
MGP_129S1SvImJ_P0028253 Xpo1 PF08389 1.7e-41 3
MGP_129S1SvImJ_P0028255 IBN_N PF03810 4.4e-12 1
MGP_129S1SvImJ_P0028255 CRM1_C PF08767 3e-134 2
MGP_129S1SvImJ_P0028255 Xpo1 PF08389 1.7e-41 3
MGP_129S1SvImJ_P0028257 CRM1_C PF08767 3.4e-19 1

RNA binding proteomes (RBPomes)

Pubmed ID Full Name Cell Author Time Doi

Literatures on RNA binding capacity

Pubmed ID Title Author Time Journal

Transcripts

Name Transcript ID bp Protein Translation ID
Xpo1-001 MGP_129S1SvImJ_T0028251 5145 1071aa MGP_129S1SvImJ_P0028251"/note="transcript_id=MGP_129S1SvImJ_T0028251
- MGP_129S1SvImJ_T0028252 4906 1071aa MGP_129S1SvImJ_P0028252"/note="transcript_id=MGP_129S1SvImJ_T0028252
- MGP_129S1SvImJ_T0028253 3471 1071aa MGP_129S1SvImJ_P0028253"/note="transcript_id=MGP_129S1SvImJ_T0028253
- MGP_129S1SvImJ_T0028254 2902 No protein -
- MGP_129S1SvImJ_T0028255 6004 1071aa MGP_129S1SvImJ_P0028255"/note="transcript_id=MGP_129S1SvImJ_T0028255
- MGP_129S1SvImJ_T0028256 463 59aa MGP_129S1SvImJ_P0028256"/note="transcript_id=MGP_129S1SvImJ_T0028256
- MGP_129S1SvImJ_T0028257 698 232aa MGP_129S1SvImJ_P0028257"/note="transcript_id=MGP_129S1SvImJ_T0028257

Pathways

Pathway ID Pathway Name Source

Phenotypes

ensgID Trait pValue Pubmed ID

GWAS

ensgIDSNPChromosomePosition TraitPubmedIDOr or BEAT EFO ID

Paralogs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
MGP_129S1SvImJ_G0018085mus_musculus_129s1svimjMGP_129S1SvImJ_P004791036.295717.0266mus_musculus_129s1svimjMGP_129S1SvImJ_P002825540.80319.141

Orthologs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
MGP_129S1SvImJ_G0018085mus_musculus_129s1svimjMGP_129S1SvImJ_P002825510099.9066mus_caroliMGP_CAROLIEiJ_P002587610099.9066
MGP_129S1SvImJ_G0018085mus_musculus_129s1svimjMGP_129S1SvImJ_P0028255100100mus_musculus_cbajMGP_CBAJ_P0027926100100
MGP_129S1SvImJ_G0018085mus_musculus_129s1svimjMGP_129S1SvImJ_P0028255100100mus_musculus_c3hhejMGP_C3HHeJ_P0028001100100
MGP_129S1SvImJ_G0018085mus_musculus_129s1svimjMGP_129S1SvImJ_P002825599.906699.9066mus_musculus_akrjMGP_AKRJ_P002818499.906699.9066
MGP_129S1SvImJ_G0018085mus_musculus_129s1svimjMGP_129S1SvImJ_P0028255100100mus_musculus_casteijMGP_CASTEiJ_P0027626100100
MGP_129S1SvImJ_G0018085mus_musculus_129s1svimjMGP_129S1SvImJ_P0028255100100mus_musculus_nodshiltjMGP_NODShiLtJ_P0028026100100
MGP_129S1SvImJ_G0018085mus_musculus_129s1svimjMGP_129S1SvImJ_P0028255100100mus_musculus_fvbnjMGP_FVBNJ_P0028044100100
MGP_129S1SvImJ_G0018085mus_musculus_129s1svimjMGP_129S1SvImJ_P0028255100100mus_spretusMGP_SPRETEiJ_P0027211100100
MGP_129S1SvImJ_G0018085mus_musculus_129s1svimjMGP_129S1SvImJ_P0028255100100mus_musculus_wsbeijMGP_WSBEiJ_P0027511100100
MGP_129S1SvImJ_G0018085mus_musculus_129s1svimjMGP_129S1SvImJ_P0028255100100mus_musculus_dba2jMGP_DBA2J_P0028054100100
MGP_129S1SvImJ_G0018085mus_musculus_129s1svimjMGP_129S1SvImJ_P0028255100100mus_musculus_balbcjMGP_BALBcJ_P0028200100100
MGP_129S1SvImJ_G0018085mus_musculus_129s1svimjMGP_129S1SvImJ_P0028255100100mus_musculus_nzohlltjMGP_NZOHlLtJ_P0028732100100
MGP_129S1SvImJ_G0018085mus_musculus_129s1svimjMGP_129S1SvImJ_P0028255100100mus_musculus_ajMGP_AJ_P0028220100100
MGP_129S1SvImJ_G0018085mus_musculus_129s1svimjMGP_129S1SvImJ_P002825599.906699.9066mus_pahariMGP_PahariEiJ_P003007699.906699.9066
MGP_129S1SvImJ_G0018085mus_musculus_129s1svimjMGP_129S1SvImJ_P002825595.798395.6116rattus_norvegicusENSRNOP0000009764810099.8051
MGP_129S1SvImJ_G0018085mus_musculus_129s1svimjMGP_129S1SvImJ_P0028255100100mus_musculusENSMUSP00000099933100100
MGP_129S1SvImJ_G0018085mus_musculus_129s1svimjMGP_129S1SvImJ_P0028255100100mus_musculus_c57bl6njMGP_C57BL6NJ_P0028698100100
MGP_129S1SvImJ_G0018085mus_musculus_129s1svimjMGP_129S1SvImJ_P0028255100100mus_musculus_pwkphjMGP_PWKPhJ_P0027328100100
MGP_129S1SvImJ_G0018085mus_musculus_129s1svimjMGP_129S1SvImJ_P0028255100100mus_spicilegusENSMSIP00000038214100100
MGP_129S1SvImJ_G0018085mus_musculus_129s1svimjMGP_129S1SvImJ_P0028255100100mus_musculus_lpjMGP_LPJ_P0028167100100

Gene Ontology

Go ID Go term No. evidence Entries Species Category

Expression