Description

Ensembl ID MGP_129S1SvImJ_G0018028 Gene ID Accession -
Symbol Tbrg4 Alias - Full Name transforming growth factor beta regulated gene 4
Status Confidence Length 11639 bases Strand Minus strand
Position 11 : 3764370 - 3776008 RNA binding domain RAP , FAST_2 , FAST_1
Summary N.A.

RNA binding domains (RBDs)

Protein Domain Pfam ID E-value Domain number
MGP_129S1SvImJ_P0028015 RAP PF08373 3.5e-10 1
MGP_129S1SvImJ_P0028015 FAST_2 PF08368 2.1e-25 2
MGP_129S1SvImJ_P0028015 FAST_1 PF06743 5.2e-21 3
MGP_129S1SvImJ_P0028016 RAP PF08373 3.5e-10 1
MGP_129S1SvImJ_P0028016 FAST_2 PF08368 2.1e-25 2
MGP_129S1SvImJ_P0028016 FAST_1 PF06743 5.2e-21 3
MGP_129S1SvImJ_P0028017 RAP PF08373 3.5e-10 1
MGP_129S1SvImJ_P0028017 FAST_2 PF08368 2.1e-25 2
MGP_129S1SvImJ_P0028017 FAST_1 PF06743 5.2e-21 3

RNA binding proteomes (RBPomes)

Pubmed ID Full Name Cell Author Time Doi

Literatures on RNA binding capacity

Pubmed ID Title Author Time Journal

Transcripts

Name Transcript ID bp Protein Translation ID
Tbrg4-001 MGP_129S1SvImJ_T0028015 2324 630aa MGP_129S1SvImJ_P0028015"/note="transcript_id=MGP_129S1SvImJ_T0028015
- MGP_129S1SvImJ_T0028016 2347 630aa MGP_129S1SvImJ_P0028016"/note="transcript_id=MGP_129S1SvImJ_T0028016
- MGP_129S1SvImJ_T0028017 2290 630aa MGP_129S1SvImJ_P0028017"/note="transcript_id=MGP_129S1SvImJ_T0028017
- MGP_129S1SvImJ_T0028018 2241 365aa MGP_129S1SvImJ_P0028018"/note="transcript_id=MGP_129S1SvImJ_T0028018
- MGP_129S1SvImJ_T0028019 682 No protein -
- MGP_129S1SvImJ_T0028020 582 No protein -
- MGP_129S1SvImJ_T0028021 602 No protein -
- MGP_129S1SvImJ_T0028022 652 No protein -
- MGP_129S1SvImJ_T0028023 380 No protein -
- MGP_129S1SvImJ_T0028024 647 158aa MGP_129S1SvImJ_P0028024"/note="transcript_id=MGP_129S1SvImJ_T0028024
- MGP_129S1SvImJ_T0028025 853 No protein -
- MGP_129S1SvImJ_T0028026 540 112aa MGP_129S1SvImJ_P0028026"/note="transcript_id=MGP_129S1SvImJ_T0028026

Pathways

Pathway ID Pathway Name Source

Phenotypes

ensgID Trait pValue Pubmed ID

GWAS

ensgIDSNPChromosomePosition TraitPubmedIDOr or BEAT EFO ID

Paralogs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
MGP_129S1SvImJ_G0018028mus_musculus_129s1svimjMGP_129S1SvImJ_P005513932.328116.0434mus_musculus_129s1svimjMGP_129S1SvImJ_P002801642.539721.1111
MGP_129S1SvImJ_G0018028mus_musculus_129s1svimjMGP_129S1SvImJ_P002023432.075514.6589mus_musculus_129s1svimjMGP_129S1SvImJ_P002801635.079416.0317
MGP_129S1SvImJ_G0018028mus_musculus_129s1svimjMGP_129S1SvImJ_P005769226.765813.1351mus_musculus_129s1svimjMGP_129S1SvImJ_P002801634.285716.8254
MGP_129S1SvImJ_G0018028mus_musculus_129s1svimjMGP_129S1SvImJ_P003752034.190618.003mus_musculus_129s1svimjMGP_129S1SvImJ_P002801635.87318.8889
MGP_129S1SvImJ_G0018028mus_musculus_129s1svimjMGP_129S1SvImJ_P007045633.761517.7982mus_musculus_129s1svimjMGP_129S1SvImJ_P002801629.206315.3968

Orthologs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
MGP_129S1SvImJ_G0018028mus_musculus_129s1svimjMGP_129S1SvImJ_P002801699.047698.254mus_caroliMGP_CAROLIEiJ_P002563299.047698.254
MGP_129S1SvImJ_G0018028mus_musculus_129s1svimjMGP_129S1SvImJ_P0028016100100mus_musculus_cbajMGP_CBAJ_P0027690100100
MGP_129S1SvImJ_G0018028mus_musculus_129s1svimjMGP_129S1SvImJ_P0028016100100mus_musculus_c3hhejMGP_C3HHeJ_P0027761100100
MGP_129S1SvImJ_G0018028mus_musculus_129s1svimjMGP_129S1SvImJ_P0028016100100mus_musculus_akrjMGP_AKRJ_P0027945100100
MGP_129S1SvImJ_G0018028mus_musculus_129s1svimjMGP_129S1SvImJ_P0028016100100mus_musculus_casteijMGP_CASTEiJ_P0027369100100
MGP_129S1SvImJ_G0018028mus_musculus_129s1svimjMGP_129S1SvImJ_P0028016100100mus_musculus_nodshiltjMGP_NODShiLtJ_P0027788100100
MGP_129S1SvImJ_G0018028mus_musculus_129s1svimjMGP_129S1SvImJ_P0028016100100mus_musculus_fvbnjMGP_FVBNJ_P0027806100100
MGP_129S1SvImJ_G0018028mus_musculus_129s1svimjMGP_129S1SvImJ_P002801699.841399.6825mus_spretusMGP_SPRETEiJ_P002696999.841399.6825
MGP_129S1SvImJ_G0018028mus_musculus_129s1svimjMGP_129S1SvImJ_P0028016100100mus_musculus_wsbeijMGP_WSBEiJ_P0027272100100
MGP_129S1SvImJ_G0018028mus_musculus_129s1svimjMGP_129S1SvImJ_P0028016100100mus_musculus_dba2jMGP_DBA2J_P0027817100100
MGP_129S1SvImJ_G0018028mus_musculus_129s1svimjMGP_129S1SvImJ_P0028016100100mus_musculus_balbcjMGP_BALBcJ_P0027965100100
MGP_129S1SvImJ_G0018028mus_musculus_129s1svimjMGP_129S1SvImJ_P0028016100100mus_musculus_nzohlltjMGP_NZOHlLtJ_P0028491100100
MGP_129S1SvImJ_G0018028mus_musculus_129s1svimjMGP_129S1SvImJ_P0028016100100mus_musculus_ajMGP_AJ_P0027985100100
MGP_129S1SvImJ_G0018028mus_musculus_129s1svimjMGP_129S1SvImJ_P002801698.571497.4603mus_pahariMGP_PahariEiJ_P003030998.728197.6153
MGP_129S1SvImJ_G0018028mus_musculus_129s1svimjMGP_129S1SvImJ_P002801696.507992.5397rattus_norvegicusENSRNOP0000007422396.661492.6868
MGP_129S1SvImJ_G0018028mus_musculus_129s1svimjMGP_129S1SvImJ_P0028016100100mus_musculusENSMUSP00000140835100100
MGP_129S1SvImJ_G0018028mus_musculus_129s1svimjMGP_129S1SvImJ_P0028016100100mus_musculus_c57bl6njMGP_C57BL6NJ_P0028462100100
MGP_129S1SvImJ_G0018028mus_musculus_129s1svimjMGP_129S1SvImJ_P0028016100100mus_musculus_pwkphjMGP_PWKPhJ_P0027065100100
MGP_129S1SvImJ_G0018028mus_musculus_129s1svimjMGP_129S1SvImJ_P002801699.682598.8889mus_spicilegusENSMSIP0000002729599.682598.8889
MGP_129S1SvImJ_G0018028mus_musculus_129s1svimjMGP_129S1SvImJ_P0028016100100mus_musculus_lpjMGP_LPJ_P0027933100100

Gene Ontology

Go ID Go term No. evidence Entries Species Category

Expression