RBP Type |
N.A. |
Diseases |
|
Drug |
|
Main interacting RNAs |
|
Moonlighting functions |
|
Localizations |
|
BulkPerturb-seq
|
|
Ensembl ID | MGP_129S1SvImJ_G0018028 | Gene ID |
|
Accession |
- |
Symbol |
Tbrg4 |
Alias |
- |
Full Name |
transforming growth factor beta regulated gene 4 |
Status |
Confidence |
Length |
11639 bases |
Strand |
Minus strand |
Position |
11 : 3764370 - 3776008 |
RNA binding domain |
RAP , FAST_2 , FAST_1 |
Summary |
N.A. |
RNA binding domains (RBDs)
Protein |
Domain |
Pfam ID |
E-value |
Domain number |
MGP_129S1SvImJ_P0028015 |
RAP |
PF08373 |
3.5e-10 |
1 |
MGP_129S1SvImJ_P0028015 |
FAST_2 |
PF08368 |
2.1e-25 |
2 |
MGP_129S1SvImJ_P0028015 |
FAST_1 |
PF06743 |
5.2e-21 |
3 |
MGP_129S1SvImJ_P0028016 |
RAP |
PF08373 |
3.5e-10 |
1 |
MGP_129S1SvImJ_P0028016 |
FAST_2 |
PF08368 |
2.1e-25 |
2 |
MGP_129S1SvImJ_P0028016 |
FAST_1 |
PF06743 |
5.2e-21 |
3 |
MGP_129S1SvImJ_P0028017 |
RAP |
PF08373 |
3.5e-10 |
1 |
MGP_129S1SvImJ_P0028017 |
FAST_2 |
PF08368 |
2.1e-25 |
2 |
MGP_129S1SvImJ_P0028017 |
FAST_1 |
PF06743 |
5.2e-21 |
3 |
RNA binding proteomes (RBPomes)
Pubmed ID |
Full Name |
Cell |
Author |
Time |
Doi |
Literatures on RNA binding capacity
Pubmed ID |
Title |
Author |
Time |
Journal |
Name |
Transcript ID |
bp |
Protein |
Translation ID |
Tbrg4-001 |
MGP_129S1SvImJ_T0028015 |
2324 |
630aa |
MGP_129S1SvImJ_P0028015"/note="transcript_id=MGP_129S1SvImJ_T0028015 |
- |
MGP_129S1SvImJ_T0028016 |
2347 |
630aa |
MGP_129S1SvImJ_P0028016"/note="transcript_id=MGP_129S1SvImJ_T0028016 |
- |
MGP_129S1SvImJ_T0028017 |
2290 |
630aa |
MGP_129S1SvImJ_P0028017"/note="transcript_id=MGP_129S1SvImJ_T0028017 |
- |
MGP_129S1SvImJ_T0028018 |
2241 |
365aa |
MGP_129S1SvImJ_P0028018"/note="transcript_id=MGP_129S1SvImJ_T0028018 |
- |
MGP_129S1SvImJ_T0028019 |
682 |
No protein |
- |
- |
MGP_129S1SvImJ_T0028020 |
582 |
No protein |
- |
- |
MGP_129S1SvImJ_T0028021 |
602 |
No protein |
- |
- |
MGP_129S1SvImJ_T0028022 |
652 |
No protein |
- |
- |
MGP_129S1SvImJ_T0028023 |
380 |
No protein |
- |
- |
MGP_129S1SvImJ_T0028024 |
647 |
158aa |
MGP_129S1SvImJ_P0028024"/note="transcript_id=MGP_129S1SvImJ_T0028024 |
- |
MGP_129S1SvImJ_T0028025 |
853 |
No protein |
- |
- |
MGP_129S1SvImJ_T0028026 |
540 |
112aa |
MGP_129S1SvImJ_P0028026"/note="transcript_id=MGP_129S1SvImJ_T0028026 |
Pathway ID |
Pathway Name |
Source |
| | |
ensgID |
Trait |
pValue |
Pubmed ID |
ensgID | SNP | Chromosome | Position |
Trait | PubmedID | Or or BEAT |
EFO ID |
Protein-Protein Interaction (PPI)
Ensembl ID |
Source |
Target |
Species |
Protein ID |
Perc_pos |
Perc_id |
Species |
Protein ID |
Perc_pos |
Perc_id |
MGP_129S1SvImJ_G0018028 | mus_musculus_129s1svimj | MGP_129S1SvImJ_P0055139 | 32.3281 | 16.0434 | mus_musculus_129s1svimj | MGP_129S1SvImJ_P0028016 | 42.5397 | 21.1111 |
MGP_129S1SvImJ_G0018028 | mus_musculus_129s1svimj | MGP_129S1SvImJ_P0020234 | 32.0755 | 14.6589 | mus_musculus_129s1svimj | MGP_129S1SvImJ_P0028016 | 35.0794 | 16.0317 |
MGP_129S1SvImJ_G0018028 | mus_musculus_129s1svimj | MGP_129S1SvImJ_P0057692 | 26.7658 | 13.1351 | mus_musculus_129s1svimj | MGP_129S1SvImJ_P0028016 | 34.2857 | 16.8254 |
MGP_129S1SvImJ_G0018028 | mus_musculus_129s1svimj | MGP_129S1SvImJ_P0037520 | 34.1906 | 18.003 | mus_musculus_129s1svimj | MGP_129S1SvImJ_P0028016 | 35.873 | 18.8889 |
MGP_129S1SvImJ_G0018028 | mus_musculus_129s1svimj | MGP_129S1SvImJ_P0070456 | 33.7615 | 17.7982 | mus_musculus_129s1svimj | MGP_129S1SvImJ_P0028016 | 29.2063 | 15.3968 |
Ensembl ID |
Source |
Target |
Species |
Protein ID |
Perc_pos |
Perc_id |
Species |
Protein ID |
Perc_pos |
Perc_id |
MGP_129S1SvImJ_G0018028 | mus_musculus_129s1svimj | MGP_129S1SvImJ_P0028016 | 99.0476 | 98.254 | mus_caroli | MGP_CAROLIEiJ_P0025632 | 99.0476 | 98.254 |
MGP_129S1SvImJ_G0018028 | mus_musculus_129s1svimj | MGP_129S1SvImJ_P0028016 | 100 | 100 | mus_musculus_cbaj | MGP_CBAJ_P0027690 | 100 | 100 |
MGP_129S1SvImJ_G0018028 | mus_musculus_129s1svimj | MGP_129S1SvImJ_P0028016 | 100 | 100 | mus_musculus_c3hhej | MGP_C3HHeJ_P0027761 | 100 | 100 |
MGP_129S1SvImJ_G0018028 | mus_musculus_129s1svimj | MGP_129S1SvImJ_P0028016 | 100 | 100 | mus_musculus_akrj | MGP_AKRJ_P0027945 | 100 | 100 |
MGP_129S1SvImJ_G0018028 | mus_musculus_129s1svimj | MGP_129S1SvImJ_P0028016 | 100 | 100 | mus_musculus_casteij | MGP_CASTEiJ_P0027369 | 100 | 100 |
MGP_129S1SvImJ_G0018028 | mus_musculus_129s1svimj | MGP_129S1SvImJ_P0028016 | 100 | 100 | mus_musculus_nodshiltj | MGP_NODShiLtJ_P0027788 | 100 | 100 |
MGP_129S1SvImJ_G0018028 | mus_musculus_129s1svimj | MGP_129S1SvImJ_P0028016 | 100 | 100 | mus_musculus_fvbnj | MGP_FVBNJ_P0027806 | 100 | 100 |
MGP_129S1SvImJ_G0018028 | mus_musculus_129s1svimj | MGP_129S1SvImJ_P0028016 | 99.8413 | 99.6825 | mus_spretus | MGP_SPRETEiJ_P0026969 | 99.8413 | 99.6825 |
MGP_129S1SvImJ_G0018028 | mus_musculus_129s1svimj | MGP_129S1SvImJ_P0028016 | 100 | 100 | mus_musculus_wsbeij | MGP_WSBEiJ_P0027272 | 100 | 100 |
MGP_129S1SvImJ_G0018028 | mus_musculus_129s1svimj | MGP_129S1SvImJ_P0028016 | 100 | 100 | mus_musculus_dba2j | MGP_DBA2J_P0027817 | 100 | 100 |
MGP_129S1SvImJ_G0018028 | mus_musculus_129s1svimj | MGP_129S1SvImJ_P0028016 | 100 | 100 | mus_musculus_balbcj | MGP_BALBcJ_P0027965 | 100 | 100 |
MGP_129S1SvImJ_G0018028 | mus_musculus_129s1svimj | MGP_129S1SvImJ_P0028016 | 100 | 100 | mus_musculus_nzohlltj | MGP_NZOHlLtJ_P0028491 | 100 | 100 |
MGP_129S1SvImJ_G0018028 | mus_musculus_129s1svimj | MGP_129S1SvImJ_P0028016 | 100 | 100 | mus_musculus_aj | MGP_AJ_P0027985 | 100 | 100 |
MGP_129S1SvImJ_G0018028 | mus_musculus_129s1svimj | MGP_129S1SvImJ_P0028016 | 98.5714 | 97.4603 | mus_pahari | MGP_PahariEiJ_P0030309 | 98.7281 | 97.6153 |
MGP_129S1SvImJ_G0018028 | mus_musculus_129s1svimj | MGP_129S1SvImJ_P0028016 | 96.5079 | 92.5397 | rattus_norvegicus | ENSRNOP00000074223 | 96.6614 | 92.6868 |
MGP_129S1SvImJ_G0018028 | mus_musculus_129s1svimj | MGP_129S1SvImJ_P0028016 | 100 | 100 | mus_musculus | ENSMUSP00000140835 | 100 | 100 |
MGP_129S1SvImJ_G0018028 | mus_musculus_129s1svimj | MGP_129S1SvImJ_P0028016 | 100 | 100 | mus_musculus_c57bl6nj | MGP_C57BL6NJ_P0028462 | 100 | 100 |
MGP_129S1SvImJ_G0018028 | mus_musculus_129s1svimj | MGP_129S1SvImJ_P0028016 | 100 | 100 | mus_musculus_pwkphj | MGP_PWKPhJ_P0027065 | 100 | 100 |
MGP_129S1SvImJ_G0018028 | mus_musculus_129s1svimj | MGP_129S1SvImJ_P0028016 | 99.6825 | 98.8889 | mus_spicilegus | ENSMSIP00000027295 | 99.6825 | 98.8889 |
MGP_129S1SvImJ_G0018028 | mus_musculus_129s1svimj | MGP_129S1SvImJ_P0028016 | 100 | 100 | mus_musculus_lpj | MGP_LPJ_P0027933 | 100 | 100 |
Go ID |
Go term |
No. evidence |
Entries |
Species |
Category |