Description

Ensembl ID MGP_129S1SvImJ_G0015853 Gene ID Accession -
Symbol Rpl7 Alias - Full Name ribosomal protein L7
Status Confidence Length 5024 bases Strand Minus strand
Position 1 : 13575738 - 13580761 RNA binding domain Ribosomal_L30 , Ribosomal_L30_N
Summary N.A.

RNA binding domains (RBDs)

Protein Domain Pfam ID E-value Domain number
MGP_129S1SvImJ_P0018990 Ribosomal_L30 PF00327 1.4e-23 1
MGP_129S1SvImJ_P0018990 Ribosomal_L30_N PF08079 5.1e-26 2
MGP_129S1SvImJ_P0018991 Ribosomal_L30 PF00327 1.4e-23 1
MGP_129S1SvImJ_P0018991 Ribosomal_L30_N PF08079 5.1e-26 2
MGP_129S1SvImJ_P0018994 Ribosomal_L30 PF00327 1.5e-23 1
MGP_129S1SvImJ_P0018994 Ribosomal_L30_N PF08079 5.4e-26 2

RNA binding proteomes (RBPomes)

Pubmed ID Full Name Cell Author Time Doi

Literatures on RNA binding capacity

Pubmed ID Title Author Time Journal

Transcripts

Name Transcript ID bp Protein Translation ID
Rpl7-006 MGP_129S1SvImJ_T0018989 421 No protein -
- MGP_129S1SvImJ_T0018990 1152 270aa MGP_129S1SvImJ_P0018990"/note="transcript_id=MGP_129S1SvImJ_T0018990
- MGP_129S1SvImJ_T0018991 877 270aa MGP_129S1SvImJ_P0018991"/note="transcript_id=MGP_129S1SvImJ_T0018991
- MGP_129S1SvImJ_T0018992 1597 No protein -
- MGP_129S1SvImJ_T0018993 1229 No protein -
- MGP_129S1SvImJ_T0018994 838 278aa MGP_129S1SvImJ_P0018994"/note="transcript_id=MGP_129S1SvImJ_T0018994
- MGP_129S1SvImJ_T0018995 784 No protein -

Pathways

Pathway ID Pathway Name Source

Phenotypes

ensgID Trait pValue Pubmed ID

GWAS

ensgIDSNPChromosomePosition TraitPubmedIDOr or BEAT EFO ID

Paralogs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
MGP_129S1SvImJ_G0015853mus_musculus_129s1svimjMGP_129S1SvImJ_P004799955.691140.2439mus_musculus_129s1svimjMGP_129S1SvImJ_P001899449.280635.6115

Orthologs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
MGP_129S1SvImJ_G0015853mus_musculus_129s1svimjMGP_129S1SvImJ_P001899498.561198.2014mus_caroliMGP_CAROLIEiJ_P001679698.207997.8495
MGP_129S1SvImJ_G0015853mus_musculus_129s1svimjMGP_129S1SvImJ_P001899460.791453.2374mus_musculus_cbajMGP_CBAJ_P001870256.902449.8316
MGP_129S1SvImJ_G0015853mus_musculus_129s1svimjMGP_129S1SvImJ_P001899490.287890.2878mus_musculus_c3hhejMGP_C3HHeJ_P001874792.96392.963
MGP_129S1SvImJ_G0015853mus_musculus_129s1svimjMGP_129S1SvImJ_P0018994100100mus_musculus_akrjMGP_AKRJ_P0018930100100
MGP_129S1SvImJ_G0015853mus_musculus_129s1svimjMGP_129S1SvImJ_P001899496.043296.0432mus_musculus_casteijMGP_CASTEiJ_P0018255100100
MGP_129S1SvImJ_G0015853mus_musculus_129s1svimjMGP_129S1SvImJ_P0018994100100mus_musculus_nodshiltjMGP_NODShiLtJ_P0018798100100
MGP_129S1SvImJ_G0015853mus_musculus_129s1svimjMGP_129S1SvImJ_P0018994100100mus_musculus_fvbnjMGP_FVBNJ_P0018832100100
MGP_129S1SvImJ_G0015853mus_musculus_129s1svimjMGP_129S1SvImJ_P001899490.287890.2878mus_spretusMGP_SPRETEiJ_P001778092.96392.963
MGP_129S1SvImJ_G0015853mus_musculus_129s1svimjMGP_129S1SvImJ_P001899442.086338.8489mus_musculus_wsbeijMGP_WSBEiJ_P001834868.023362.7907
MGP_129S1SvImJ_G0015853mus_musculus_129s1svimjMGP_129S1SvImJ_P001899498.201498.2014mus_musculus_dba2jMGP_DBA2J_P001881898.201498.2014
MGP_129S1SvImJ_G0015853mus_musculus_129s1svimjMGP_129S1SvImJ_P0018994100100mus_musculus_balbcjMGP_BALBcJ_P0018918100100
MGP_129S1SvImJ_G0015853mus_musculus_129s1svimjMGP_129S1SvImJ_P001899492.086392.0863mus_musculus_nzohlltjMGP_NZOHlLtJ_P001946999.224899.2248
MGP_129S1SvImJ_G0015853mus_musculus_129s1svimjMGP_129S1SvImJ_P0018994100100mus_musculus_ajMGP_AJ_P0018967100100
MGP_129S1SvImJ_G0015853mus_musculus_129s1svimjMGP_129S1SvImJ_P001899488.489288.1295mus_pahariMGP_PahariEiJ_P005670691.111190.7407
MGP_129S1SvImJ_G0015853mus_musculus_129s1svimjMGP_129S1SvImJ_P001899478.77774.4604rattus_norvegicusENSRNOP0000007970090.871485.8921
MGP_129S1SvImJ_G0015853mus_musculus_129s1svimjMGP_129S1SvImJ_P001899460.791458.2734rattus_norvegicusENSRNOP0000009616085.786882.2335
MGP_129S1SvImJ_G0015853mus_musculus_129s1svimjMGP_129S1SvImJ_P001899432.014429.1367rattus_norvegicusENSRNOP0000004579865.441259.5588
MGP_129S1SvImJ_G0015853mus_musculus_129s1svimjMGP_129S1SvImJ_P001899461.151160.7914rattus_norvegicusENSRNOP0000005885989.473788.9474
MGP_129S1SvImJ_G0015853mus_musculus_129s1svimjMGP_129S1SvImJ_P0018994100100mus_musculusENSMUSP0000011869599.641699.6416
MGP_129S1SvImJ_G0015853mus_musculus_129s1svimjMGP_129S1SvImJ_P001899497.122397.1223mus_musculus_c57bl6njMGP_C57BL6NJ_P001942397.826197.8261
MGP_129S1SvImJ_G0015853mus_musculus_129s1svimjMGP_129S1SvImJ_P001899482.014480.5755mus_musculus_pwkphjMGP_PWKPhJ_P001801179.720378.3217
MGP_129S1SvImJ_G0015853mus_musculus_129s1svimjMGP_129S1SvImJ_P001899490.287890.2878mus_spicilegusENSMSIP0000000960092.96392.963
MGP_129S1SvImJ_G0015853mus_musculus_129s1svimjMGP_129S1SvImJ_P001899462.949662.2302mus_spicilegusENSMSIP0000002773788.383887.3737
MGP_129S1SvImJ_G0015853mus_musculus_129s1svimjMGP_129S1SvImJ_P0018994100100mus_musculus_lpjMGP_LPJ_P0018907100100

Gene Ontology

Go ID Go term No. evidence Entries Species Category

Expression