RBP Type |
N.A. |
Diseases |
|
Drug |
|
Main interacting RNAs |
|
Moonlighting functions |
|
Localizations |
|
BulkPerturb-seq
|
|
Ensembl ID | MGP_129S1SvImJ_G0015853 | Gene ID |
|
Accession |
- |
Symbol |
Rpl7 |
Alias |
- |
Full Name |
ribosomal protein L7 |
Status |
Confidence |
Length |
5024 bases |
Strand |
Minus strand |
Position |
1 : 13575738 - 13580761 |
RNA binding domain |
Ribosomal_L30 , Ribosomal_L30_N |
Summary |
N.A. |
RNA binding domains (RBDs)
Protein |
Domain |
Pfam ID |
E-value |
Domain number |
MGP_129S1SvImJ_P0018990 |
Ribosomal_L30 |
PF00327 |
1.4e-23 |
1 |
MGP_129S1SvImJ_P0018990 |
Ribosomal_L30_N |
PF08079 |
5.1e-26 |
2 |
MGP_129S1SvImJ_P0018991 |
Ribosomal_L30 |
PF00327 |
1.4e-23 |
1 |
MGP_129S1SvImJ_P0018991 |
Ribosomal_L30_N |
PF08079 |
5.1e-26 |
2 |
MGP_129S1SvImJ_P0018994 |
Ribosomal_L30 |
PF00327 |
1.5e-23 |
1 |
MGP_129S1SvImJ_P0018994 |
Ribosomal_L30_N |
PF08079 |
5.4e-26 |
2 |
RNA binding proteomes (RBPomes)
Pubmed ID |
Full Name |
Cell |
Author |
Time |
Doi |
Literatures on RNA binding capacity
Pubmed ID |
Title |
Author |
Time |
Journal |
Name |
Transcript ID |
bp |
Protein |
Translation ID |
Rpl7-006 |
MGP_129S1SvImJ_T0018989 |
421 |
No protein |
- |
- |
MGP_129S1SvImJ_T0018990 |
1152 |
270aa |
MGP_129S1SvImJ_P0018990"/note="transcript_id=MGP_129S1SvImJ_T0018990 |
- |
MGP_129S1SvImJ_T0018991 |
877 |
270aa |
MGP_129S1SvImJ_P0018991"/note="transcript_id=MGP_129S1SvImJ_T0018991 |
- |
MGP_129S1SvImJ_T0018992 |
1597 |
No protein |
- |
- |
MGP_129S1SvImJ_T0018993 |
1229 |
No protein |
- |
- |
MGP_129S1SvImJ_T0018994 |
838 |
278aa |
MGP_129S1SvImJ_P0018994"/note="transcript_id=MGP_129S1SvImJ_T0018994 |
- |
MGP_129S1SvImJ_T0018995 |
784 |
No protein |
- |
Pathway ID |
Pathway Name |
Source |
| | |
ensgID |
Trait |
pValue |
Pubmed ID |
ensgID | SNP | Chromosome | Position |
Trait | PubmedID | Or or BEAT |
EFO ID |
Protein-Protein Interaction (PPI)
Ensembl ID |
Source |
Target |
Species |
Protein ID |
Perc_pos |
Perc_id |
Species |
Protein ID |
Perc_pos |
Perc_id |
MGP_129S1SvImJ_G0015853 | mus_musculus_129s1svimj | MGP_129S1SvImJ_P0047999 | 55.6911 | 40.2439 | mus_musculus_129s1svimj | MGP_129S1SvImJ_P0018994 | 49.2806 | 35.6115 |
Ensembl ID |
Source |
Target |
Species |
Protein ID |
Perc_pos |
Perc_id |
Species |
Protein ID |
Perc_pos |
Perc_id |
MGP_129S1SvImJ_G0015853 | mus_musculus_129s1svimj | MGP_129S1SvImJ_P0018994 | 98.5611 | 98.2014 | mus_caroli | MGP_CAROLIEiJ_P0016796 | 98.2079 | 97.8495 |
MGP_129S1SvImJ_G0015853 | mus_musculus_129s1svimj | MGP_129S1SvImJ_P0018994 | 60.7914 | 53.2374 | mus_musculus_cbaj | MGP_CBAJ_P0018702 | 56.9024 | 49.8316 |
MGP_129S1SvImJ_G0015853 | mus_musculus_129s1svimj | MGP_129S1SvImJ_P0018994 | 90.2878 | 90.2878 | mus_musculus_c3hhej | MGP_C3HHeJ_P0018747 | 92.963 | 92.963 |
MGP_129S1SvImJ_G0015853 | mus_musculus_129s1svimj | MGP_129S1SvImJ_P0018994 | 100 | 100 | mus_musculus_akrj | MGP_AKRJ_P0018930 | 100 | 100 |
MGP_129S1SvImJ_G0015853 | mus_musculus_129s1svimj | MGP_129S1SvImJ_P0018994 | 96.0432 | 96.0432 | mus_musculus_casteij | MGP_CASTEiJ_P0018255 | 100 | 100 |
MGP_129S1SvImJ_G0015853 | mus_musculus_129s1svimj | MGP_129S1SvImJ_P0018994 | 100 | 100 | mus_musculus_nodshiltj | MGP_NODShiLtJ_P0018798 | 100 | 100 |
MGP_129S1SvImJ_G0015853 | mus_musculus_129s1svimj | MGP_129S1SvImJ_P0018994 | 100 | 100 | mus_musculus_fvbnj | MGP_FVBNJ_P0018832 | 100 | 100 |
MGP_129S1SvImJ_G0015853 | mus_musculus_129s1svimj | MGP_129S1SvImJ_P0018994 | 90.2878 | 90.2878 | mus_spretus | MGP_SPRETEiJ_P0017780 | 92.963 | 92.963 |
MGP_129S1SvImJ_G0015853 | mus_musculus_129s1svimj | MGP_129S1SvImJ_P0018994 | 42.0863 | 38.8489 | mus_musculus_wsbeij | MGP_WSBEiJ_P0018348 | 68.0233 | 62.7907 |
MGP_129S1SvImJ_G0015853 | mus_musculus_129s1svimj | MGP_129S1SvImJ_P0018994 | 98.2014 | 98.2014 | mus_musculus_dba2j | MGP_DBA2J_P0018818 | 98.2014 | 98.2014 |
MGP_129S1SvImJ_G0015853 | mus_musculus_129s1svimj | MGP_129S1SvImJ_P0018994 | 100 | 100 | mus_musculus_balbcj | MGP_BALBcJ_P0018918 | 100 | 100 |
MGP_129S1SvImJ_G0015853 | mus_musculus_129s1svimj | MGP_129S1SvImJ_P0018994 | 92.0863 | 92.0863 | mus_musculus_nzohlltj | MGP_NZOHlLtJ_P0019469 | 99.2248 | 99.2248 |
MGP_129S1SvImJ_G0015853 | mus_musculus_129s1svimj | MGP_129S1SvImJ_P0018994 | 100 | 100 | mus_musculus_aj | MGP_AJ_P0018967 | 100 | 100 |
MGP_129S1SvImJ_G0015853 | mus_musculus_129s1svimj | MGP_129S1SvImJ_P0018994 | 88.4892 | 88.1295 | mus_pahari | MGP_PahariEiJ_P0056706 | 91.1111 | 90.7407 |
MGP_129S1SvImJ_G0015853 | mus_musculus_129s1svimj | MGP_129S1SvImJ_P0018994 | 78.777 | 74.4604 | rattus_norvegicus | ENSRNOP00000079700 | 90.8714 | 85.8921 |
MGP_129S1SvImJ_G0015853 | mus_musculus_129s1svimj | MGP_129S1SvImJ_P0018994 | 60.7914 | 58.2734 | rattus_norvegicus | ENSRNOP00000096160 | 85.7868 | 82.2335 |
MGP_129S1SvImJ_G0015853 | mus_musculus_129s1svimj | MGP_129S1SvImJ_P0018994 | 32.0144 | 29.1367 | rattus_norvegicus | ENSRNOP00000045798 | 65.4412 | 59.5588 |
MGP_129S1SvImJ_G0015853 | mus_musculus_129s1svimj | MGP_129S1SvImJ_P0018994 | 61.1511 | 60.7914 | rattus_norvegicus | ENSRNOP00000058859 | 89.4737 | 88.9474 |
MGP_129S1SvImJ_G0015853 | mus_musculus_129s1svimj | MGP_129S1SvImJ_P0018994 | 100 | 100 | mus_musculus | ENSMUSP00000118695 | 99.6416 | 99.6416 |
MGP_129S1SvImJ_G0015853 | mus_musculus_129s1svimj | MGP_129S1SvImJ_P0018994 | 97.1223 | 97.1223 | mus_musculus_c57bl6nj | MGP_C57BL6NJ_P0019423 | 97.8261 | 97.8261 |
MGP_129S1SvImJ_G0015853 | mus_musculus_129s1svimj | MGP_129S1SvImJ_P0018994 | 82.0144 | 80.5755 | mus_musculus_pwkphj | MGP_PWKPhJ_P0018011 | 79.7203 | 78.3217 |
MGP_129S1SvImJ_G0015853 | mus_musculus_129s1svimj | MGP_129S1SvImJ_P0018994 | 90.2878 | 90.2878 | mus_spicilegus | ENSMSIP00000009600 | 92.963 | 92.963 |
MGP_129S1SvImJ_G0015853 | mus_musculus_129s1svimj | MGP_129S1SvImJ_P0018994 | 62.9496 | 62.2302 | mus_spicilegus | ENSMSIP00000027737 | 88.3838 | 87.3737 |
MGP_129S1SvImJ_G0015853 | mus_musculus_129s1svimj | MGP_129S1SvImJ_P0018994 | 100 | 100 | mus_musculus_lpj | MGP_LPJ_P0018907 | 100 | 100 |
Go ID |
Go term |
No. evidence |
Entries |
Species |
Category |