RBPWorld - a comprehensive database of RNA Binding Proteins

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RBP World!

Description

Ensembl ID	MD12G0209800	Gene ID		Accession	-
Symbol		Alias	-	Full Name	NA
Status	Confidence	Length	2644 bases	Strand	Plus strand
Position	12 : 32156048 - 32158691	RNA binding domain	ECR1_N , EXOSC1
Summary	N.A.

RNA binding domains (RBDs)

Protein	Domain	Pfam ID	E-value	Domain number
mRNA:MD12G0209800	ECR1_N	PF14382	4.3e-10	1
mRNA:MD12G0209800	EXOSC1	PF10447	1.9e-16	2

RNA binding proteomes (RBPomes)

Pubmed ID	Full Name	Cell	Author	Time	Doi

Literatures on RNA binding capacity

Pubmed ID	Title	Author	Time	Journal

Transcripts

Name	Transcript ID	bp	Protein	Translation ID
-	mRNA:MD12G0209800	1064	196aa	mRNA:MD12G0209800

Gene Model

Click here to download MD12G0209800's gene model file

Pathways

Pathway ID	Pathway Name	Source

Phenotypes

ensgID	Trait	pValue	Pubmed ID

GWAS

ensgID	SNP	Chromosome	Position	Trait	PubmedID	Or or BEAT	EFO ID

Protein-Protein Interaction (PPI)

Click here to download MD12G0209800's PPI file

Paralogs

Ensembl ID	Source				Target
Ensembl ID	Species	Protein ID	Perc_pos	Perc_id	Species	Protein ID	Perc_pos	Perc_id
MD12G0209800

Orthologs

Ensembl ID	Source				Target
Ensembl ID	Species	Protein ID	Perc_pos	Perc_id	Species	Protein ID	Perc_pos	Perc_id
MD12G0209800

Gene Ontology

Go ID	Go term	No. evidence	Entries	Species	Category

Expression