RBPWorld - a comprehensive database of RNA Binding Proteins

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RBP World!

Description

Ensembl ID	MD06G0116600	Gene ID		Accession	-
Symbol		Alias	-	Full Name	NA
Status	Confidence	Length	7820 bases	Strand	Minus strand
Position	6 : 28792669 - 28800488	RNA binding domain	Lactamase_B , RMMBL
Summary	N.A.

RNA binding domains (RBDs)

Protein	Domain	Pfam ID	E-value	Domain number
mRNA:MD06G0116600	Lactamase_B	PF00753	4.8e-08	1
mRNA:MD06G0116600	RMMBL	PF07521	3.9e-06	2

RNA binding proteomes (RBPomes)

Pubmed ID	Full Name	Cell	Author	Time	Doi

Literatures on RNA binding capacity

Pubmed ID	Title	Author	Time	Journal

Transcripts

Name	Transcript ID	bp	Protein	Translation ID
-	mRNA:MD06G0116600	3311	917aa	mRNA:MD06G0116600

Gene Model

Click here to download MD06G0116600's gene model file

Pathways

Pathway ID	Pathway Name	Source

Phenotypes

ensgID	Trait	pValue	Pubmed ID

GWAS

ensgID	SNP	Chromosome	Position	Trait	PubmedID	Or or BEAT	EFO ID

Protein-Protein Interaction (PPI)

Click here to download MD06G0116600's PPI file

Paralogs

Ensembl ID	Source				Target
Ensembl ID	Species	Protein ID	Perc_pos	Perc_id	Species	Protein ID	Perc_pos	Perc_id
MD06G0116600

Orthologs

Ensembl ID	Source				Target
Ensembl ID	Species	Protein ID	Perc_pos	Perc_id	Species	Protein ID	Perc_pos	Perc_id
MD06G0116600

Gene Ontology

Go ID	Go term	No. evidence	Entries	Species	Category

Expression