RBPWorld - a comprehensive database of RNA Binding Proteins

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RBP World!

Description

Ensembl ID	MD01G0078600	Gene ID		Accession	-
Symbol		Alias	-	Full Name	NA
Status	Confidence	Length	3987 bases	Strand	Plus strand
Position	1 : 21472344 - 21476330	RNA binding domain	RVT_2
Summary	N.A.

RNA binding domains (RBDs)

Protein	Domain	Pfam ID	E-value	Domain number
mRNA:MD01G0078600	RVT_2	PF07727	2.6e-87	1

RNA binding proteomes (RBPomes)

Pubmed ID	Full Name	Cell	Author	Time	Doi

Literatures on RNA binding capacity

Pubmed ID	Title	Author	Time	Journal

Transcripts

Name	Transcript ID	bp	Protein	Translation ID
-	mRNA:MD01G0078600	3930	1309aa	mRNA:MD01G0078600

Gene Model

Click here to download MD01G0078600's gene model file

Pathways

Pathway ID	Pathway Name	Source

Phenotypes

ensgID	Trait	pValue	Pubmed ID

GWAS

ensgID	SNP	Chromosome	Position	Trait	PubmedID	Or or BEAT	EFO ID

Protein-Protein Interaction (PPI)

Click here to download MD01G0078600's PPI file

Paralogs

Ensembl ID	Source				Target
Ensembl ID	Species	Protein ID	Perc_pos	Perc_id	Species	Protein ID	Perc_pos	Perc_id
MD01G0078600

Orthologs

Ensembl ID	Source				Target
Ensembl ID	Species	Protein ID	Perc_pos	Perc_id	Species	Protein ID	Perc_pos	Perc_id
MD01G0078600

Gene Ontology

Go ID	Go term	No. evidence	Entries	Species	Category

Expression