RBPWorld - a comprehensive database of RNA Binding Proteins

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RBP World!

Description

Ensembl ID	MARPO_0004s0135	Gene ID		Accession	-
Symbol		Alias	-	Full Name	hypothetical protein
Status	Confidence	Length	4693 bases	Strand	Plus strand
Position	KZ772676 : 1496835 - 1501527	RNA binding domain	GTP_EFTU , MMR_HSR1 , GTP_EFTU_D2
Summary	N.A.

RNA binding domains (RBDs)

Protein	Domain	Pfam ID	E-value	Domain number
PTQ48872	GTP_EFTU	PF00009	2.7e-51	1
PTQ48872	MMR_HSR1	PF01926	8.6e-06	2
PTQ48872	GTP_EFTU_D2	PF03144	1.1e-07	3

RNA binding proteomes (RBPomes)

Pubmed ID	Full Name	Cell	Author	Time	Doi

Literatures on RNA binding capacity

Pubmed ID	Title	Author	Time	Journal

Transcripts

Name	Transcript ID	bp	Protein	Translation ID
-	PTQ48872	2587	684aa	PTQ48872

Gene Model

Click here to download MARPO_0004s0135's gene model file

Pathways

Pathway ID	Pathway Name	Source

Phenotypes

ensgID	Trait	pValue	Pubmed ID

GWAS

ensgID	SNP	Chromosome	Position	Trait	PubmedID	Or or BEAT	EFO ID

Protein-Protein Interaction (PPI)

Click here to download MARPO_0004s0135's PPI file

Paralogs

Ensembl ID	Source				Target
Ensembl ID	Species	Protein ID	Perc_pos	Perc_id	Species	Protein ID	Perc_pos	Perc_id
MARPO_0004s0135

Orthologs

Ensembl ID	Source				Target
Ensembl ID	Species	Protein ID	Perc_pos	Perc_id	Species	Protein ID	Perc_pos	Perc_id
MARPO_0004s0135

Gene Ontology

Go ID	Go term	No. evidence	Entries	Species	Category

Expression