RBPWorld - a comprehensive database of RNA Binding Proteins

Welcome to

RBP World!

Description

Ensembl ID	MANES_16G107800	Gene ID		Accession	-
Symbol		Alias	-	Full Name	hypothetical protein
Status	Confidence	Length	7440 bases	Strand	Plus strand
Position	LG16 : 26332424 - 26339863	RNA binding domain	tRNA-synt_1d , Arg_tRNA_synt_N , DALR_1
Summary	N.A.

RNA binding domains (RBDs)

Protein	Domain	Pfam ID	E-value	Domain number
OAY27198	tRNA-synt_1d	PF00750	6.7e-118	1
OAY27198	Arg_tRNA_synt_N	PF03485	3.7e-16	2
OAY27198	DALR_1	PF05746	4.3e-30	3

RNA binding proteomes (RBPomes)

Pubmed ID	Full Name	Cell	Author	Time	Doi

Literatures on RNA binding capacity

Pubmed ID	Title	Author	Time	Journal

Transcripts

Name	Transcript ID	bp	Protein	Translation ID
-	OAY27198	2401	589aa	OAY27198

Gene Model

Click here to download MANES_16G107800's gene model file

Pathways

Pathway ID	Pathway Name	Source

Phenotypes

ensgID	Trait	pValue	Pubmed ID

GWAS

ensgID	SNP	Chromosome	Position	Trait	PubmedID	Or or BEAT	EFO ID

Protein-Protein Interaction (PPI)

Click here to download MANES_16G107800's PPI file

Paralogs

Ensembl ID	Source				Target
Ensembl ID	Species	Protein ID	Perc_pos	Perc_id	Species	Protein ID	Perc_pos	Perc_id
MANES_16G107800

Orthologs

Ensembl ID	Source				Target
Ensembl ID	Species	Protein ID	Perc_pos	Perc_id	Species	Protein ID	Perc_pos	Perc_id
MANES_16G107800

Gene Ontology

Go ID	Go term	No. evidence	Entries	Species	Category

Expression