RBPWorld - a comprehensive database of RNA Binding Proteins

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RBP World!

Description

Ensembl ID	MANES_09G105300	Gene ID		Accession	-
Symbol		Alias	-	Full Name	HEAT repeat-containing protein
Status	Confidence	Length	7225 bases	Strand	Plus strand
Position	LG9 : 22586258 - 22593482	RNA binding domain	SYMPK_PTA1_N
Summary	N.A.

RNA binding domains (RBDs)

Protein	Domain	Pfam ID	E-value	Domain number
OAY41482	SYMPK_PTA1_N	PF11935	1.3e-35	1

RNA binding proteomes (RBPomes)

Pubmed ID	Full Name	Cell	Author	Time	Doi

Literatures on RNA binding capacity

Pubmed ID	Title	Author	Time	Journal

Transcripts

Name	Transcript ID	bp	Protein	Translation ID
-	OAY41482	2986	910aa	OAY41482

Gene Model

Click here to download MANES_09G105300's gene model file

Pathways

Pathway ID	Pathway Name	Source

Phenotypes

ensgID	Trait	pValue	Pubmed ID

GWAS

ensgID	SNP	Chromosome	Position	Trait	PubmedID	Or or BEAT	EFO ID

Protein-Protein Interaction (PPI)

Click here to download MANES_09G105300's PPI file

Paralogs

Ensembl ID	Source				Target
Ensembl ID	Species	Protein ID	Perc_pos	Perc_id	Species	Protein ID	Perc_pos	Perc_id
MANES_09G105300

Orthologs

Ensembl ID	Source				Target
Ensembl ID	Species	Protein ID	Perc_pos	Perc_id	Species	Protein ID	Perc_pos	Perc_id
MANES_09G105300

Gene Ontology

Go ID	Go term	No. evidence	Entries	Species	Category

Expression