RBPWorld - a comprehensive database of RNA Binding Proteins

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RBP World!

Description

Ensembl ID	MANES_09G100900	Gene ID		Accession	-
Symbol		Alias	-	Full Name	hypothetical protein
Status	Confidence	Length	2044 bases	Strand	Plus strand
Position	LG9 : 21994337 - 21996380	RNA binding domain	Ribosomal_L35Ae
Summary	N.A.

RNA binding domains (RBDs)

Protein	Domain	Pfam ID	E-value	Domain number
OAY41426	Ribosomal_L35Ae	PF01247	6.7e-44	1
OAY41427	Ribosomal_L35Ae	PF01247	7.7e-41	1

RNA binding proteomes (RBPomes)

Pubmed ID	Full Name	Cell	Author	Time	Doi

Literatures on RNA binding capacity

Pubmed ID	Title	Author	Time	Journal

Transcripts

Name	Transcript ID	bp	Protein	Translation ID
-	OAY41427	327	108aa	OAY41427
-	OAY41426	1752	112aa	OAY41426

Gene Model

Click here to download MANES_09G100900's gene model file

Pathways

Pathway ID	Pathway Name	Source

Phenotypes

ensgID	Trait	pValue	Pubmed ID

GWAS

ensgID	SNP	Chromosome	Position	Trait	PubmedID	Or or BEAT	EFO ID

Protein-Protein Interaction (PPI)

Click here to download MANES_09G100900's PPI file

Paralogs

Ensembl ID	Source				Target
Ensembl ID	Species	Protein ID	Perc_pos	Perc_id	Species	Protein ID	Perc_pos	Perc_id
MANES_09G100900

Orthologs

Ensembl ID	Source				Target
Ensembl ID	Species	Protein ID	Perc_pos	Perc_id	Species	Protein ID	Perc_pos	Perc_id
MANES_09G100900

Gene Ontology

Go ID	Go term	No. evidence	Entries	Species	Category

Expression