Description

Ensembl ID LR48_Vigan499s005800 Gene ID Accession -
Symbol Alias - Full Name hypothetical protein
Status Confidence Length 3012 bases Strand Plus strand
Position KQ258413 : 630071 - 633082 RNA binding domain RNA_pol_Rpb1_4 , RNA_pol_Rpb1_5 , RNA_pol_Rpb1_R , RNA_pol_Rpb1_6 , RNA_pol_Rpb1_7
Summary N.A.

RNA binding domains (RBDs)

Protein Domain Pfam ID E-value Domain number
KOM28114 RNA_pol_Rpb1_4 PF05000 3.2e-24 1
KOM28114 RNA_pol_Rpb1_5 PF04998 2.2e-106 2
KOM28114 RNA_pol_Rpb1_R PF05001 5.3e-25 3
KOM28114 RNA_pol_Rpb1_R PF05001 5.3e-25 4
KOM28114 RNA_pol_Rpb1_R PF05001 5.3e-25 5
KOM28114 RNA_pol_Rpb1_R PF05001 5.3e-25 6
KOM28114 RNA_pol_Rpb1_R PF05001 5.3e-25 7
KOM28114 RNA_pol_Rpb1_R PF05001 5.3e-25 8
KOM28114 RNA_pol_Rpb1_R PF05001 5.3e-25 9
KOM28114 RNA_pol_Rpb1_R PF05001 5.3e-25 10
KOM28114 RNA_pol_Rpb1_R PF05001 5.3e-25 11
KOM28114 RNA_pol_Rpb1_R PF05001 5.3e-25 12
KOM28114 RNA_pol_Rpb1_R PF05001 5.3e-25 13
KOM28114 RNA_pol_Rpb1_R PF05001 5.3e-25 14
KOM28114 RNA_pol_Rpb1_R PF05001 5.3e-25 15
KOM28114 RNA_pol_Rpb1_R PF05001 5.3e-25 16
KOM28114 RNA_pol_Rpb1_R PF05001 5.3e-25 17
KOM28114 RNA_pol_Rpb1_R PF05001 5.3e-25 18
KOM28114 RNA_pol_Rpb1_6 PF04992 2.6e-66 19
KOM28114 RNA_pol_Rpb1_7 PF04990 5.8e-54 20

RNA binding proteomes (RBPomes)

Pubmed ID Full Name Cell Author Time Doi

Literatures on RNA binding capacity

Pubmed ID Title Author Time Journal

Transcripts

Name Transcript ID bp Protein Translation ID
- KOM28114 3012 1003aa KOM28114

Gene Model

Pathways

Pathway ID Pathway Name Source

Phenotypes

ensgID Trait pValue Pubmed ID

GWAS

ensgIDSNPChromosomePosition TraitPubmedIDOr or BEAT EFO ID

Protein-Protein Interaction (PPI)

Paralogs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
LR48_Vigan499s005800

Orthologs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
LR48_Vigan499s005800

Gene Ontology

Go ID Go term No. evidence Entries Species Category

Expression