Description

Ensembl ID LR48_Vigan10g166400 Gene ID Accession -
Symbol Alias - Full Name hypothetical protein
Status Confidence Length 4728 bases Strand Plus strand
Position 10 : 22958765 - 22963492 RNA binding domain PPR_3 , PPR , Ribosomal_S5
Summary N.A.

RNA binding domains (RBDs)

Protein Domain Pfam ID E-value Domain number
KOM55772 PPR_3 PF13812 1e-11 1
KOM55772 PPR PF01535 7.3e-34 2
KOM55772 PPR PF01535 7.3e-34 3
KOM55772 PPR PF01535 7.3e-34 4
KOM55772 PPR PF01535 7.3e-34 5
KOM55772 Ribosomal_S5 PF00333 7.7e-21 6

RNA binding proteomes (RBPomes)

Pubmed ID Full Name Cell Author Time Doi

Literatures on RNA binding capacity

Pubmed ID Title Author Time Journal

Transcripts

Name Transcript ID bp Protein Translation ID
- KOM55772 1530 509aa KOM55772

Pathways

Pathway ID Pathway Name Source

Phenotypes

ensgID Trait pValue Pubmed ID

GWAS

ensgIDSNPChromosomePosition TraitPubmedIDOr or BEAT EFO ID

Protein-Protein Interaction (PPI)

Paralogs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
LR48_Vigan10g166400

Orthologs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
LR48_Vigan10g166400

Gene Ontology

Go ID Go term No. evidence Entries Species Category

Expression