Description

Ensembl ID LR48_Vigan09g014900 Gene ID Accession -
Symbol Alias - Full Name hypothetical protein
Status Confidence Length 2714 bases Strand Plus strand
Position 9 : 2133855 - 2136568 RNA binding domain PABP , RRM_5 , RRM_1
Summary N.A.

RNA binding domains (RBDs)

Protein Domain Pfam ID E-value Domain number
KOM51490 PABP PF00658 1.2e-23 1
KOM51490 RRM_5 PF13893 5.8e-14 2
KOM51490 RRM_5 PF13893 5.8e-14 3
KOM51490 RRM_5 PF13893 5.8e-14 4
KOM51490 RRM_1 PF00076 3.3e-81 5
KOM51490 RRM_1 PF00076 3.3e-81 6
KOM51490 RRM_1 PF00076 3.3e-81 7
KOM51490 RRM_1 PF00076 3.3e-81 8

RNA binding proteomes (RBPomes)

Pubmed ID Full Name Cell Author Time Doi

Literatures on RNA binding capacity

Pubmed ID Title Author Time Journal

Transcripts

Name Transcript ID bp Protein Translation ID
- KOM51490 1782 593aa KOM51490

Pathways

Pathway ID Pathway Name Source

Phenotypes

ensgID Trait pValue Pubmed ID

GWAS

ensgIDSNPChromosomePosition TraitPubmedIDOr or BEAT EFO ID

Protein-Protein Interaction (PPI)

Paralogs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
LR48_Vigan09g014900

Orthologs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
LR48_Vigan09g014900

Gene Ontology

Go ID Go term No. evidence Entries Species Category

Expression