Description

Ensembl ID LR48_Vigan08g004100 Gene ID Accession -
Symbol Alias - Full Name DNA-directed RNA polymerase V subunit 1
Status Confidence Length 4773 bases Strand Minus strand
Position 8 : 584766 - 589538 RNA binding domain RNA_pol_Rpb1_5 , RNA_pol_Rpb1_2 , RNA_pol_Rpb1_3
Summary N.A.

RNA binding domains (RBDs)

Protein Domain Pfam ID E-value Domain number
KOM49214 RNA_pol_Rpb1_5 PF04998 2.9e-07 1
KOM49214 RNA_pol_Rpb1_2 PF00623 2.4e-32 2
KOM49214 RNA_pol_Rpb1_3 PF04983 2.5e-09 3

RNA binding proteomes (RBPomes)

Pubmed ID Full Name Cell Author Time Doi

Literatures on RNA binding capacity

Pubmed ID Title Author Time Journal

Transcripts

Name Transcript ID bp Protein Translation ID
- KOM49214 2544 847aa KOM49214

Gene Model

Pathways

Pathway ID Pathway Name Source

Phenotypes

ensgID Trait pValue Pubmed ID

GWAS

ensgIDSNPChromosomePosition TraitPubmedIDOr or BEAT EFO ID

Protein-Protein Interaction (PPI)

Paralogs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
LR48_Vigan08g004100

Orthologs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
LR48_Vigan08g004100

Gene Ontology

Go ID Go term No. evidence Entries Species Category

Expression