Description

Ensembl ID LR48_Vigan02g030100 Gene ID Accession -
Symbol Alias - Full Name hypothetical protein
Status Confidence Length 16228 bases Strand Minus strand
Position 2 : 3424928 - 3441155 RNA binding domain RNA_pol_Rpb1_4 , RNA_pol_Rpb1_1 , RNA_pol_Rpb1_5 , RNA_pol_Rpb1_2 , RNA_pol_Rpb1_3
Summary N.A.

RNA binding domains (RBDs)

Protein Domain Pfam ID E-value Domain number
KOM34151 RNA_pol_Rpb1_4 PF05000 1.1e-21 1
KOM34151 RNA_pol_Rpb1_1 PF04997 4.4e-22 2
KOM34151 RNA_pol_Rpb1_5 PF04998 6.8e-86 3
KOM34151 RNA_pol_Rpb1_2 PF00623 2.3e-58 4
KOM34151 RNA_pol_Rpb1_3 PF04983 8.1e-32 5

RNA binding proteomes (RBPomes)

Pubmed ID Full Name Cell Author Time Doi

Literatures on RNA binding capacity

Pubmed ID Title Author Time Journal

Transcripts

Name Transcript ID bp Protein Translation ID
- KOM34151 4779 1592aa KOM34151

Pathways

Pathway ID Pathway Name Source

Phenotypes

ensgID Trait pValue Pubmed ID

GWAS

ensgIDSNPChromosomePosition TraitPubmedIDOr or BEAT EFO ID

Protein-Protein Interaction (PPI)

Paralogs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
LR48_Vigan02g030100

Orthologs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
LR48_Vigan02g030100

Gene Ontology

Go ID Go term No. evidence Entries Species Category

Expression