Description

Ensembl ID LPERR09G05730 Gene ID Accession -
Symbol Alias - Full Name NA
Status Confidence Length 6430 bases Strand Minus strand
Position 9 : 7496534 - 7502963 RNA binding domain IF2_N , GTP_EFTU , MMR_HSR1 , IF-2
Summary N.A.

RNA binding domains (RBDs)

Protein Domain Pfam ID E-value Domain number
LPERR09G05730 IF2_N PF04760 5.2e-06 1
LPERR09G05730 IF2_N PF04760 5.3e-06 2
LPERR09G05730 IF2_N PF04760 8.4e-06 3
LPERR09G05730 IF2_N PF04760 8.9e-06 4
LPERR09G05730 IF2_N PF04760 9.9e-06 5
LPERR09G05730 IF2_N PF04760 1e-05 6
LPERR09G05730 GTP_EFTU PF00009 1.2e-33 7
LPERR09G05730 GTP_EFTU PF00009 1.5e-33 8
LPERR09G05730 GTP_EFTU PF00009 2.1e-26 9
LPERR09G05730 GTP_EFTU PF00009 2.2e-26 10
LPERR09G05730 GTP_EFTU PF00009 3.5e-25 11
LPERR09G05730 GTP_EFTU PF00009 4.5e-25 12
LPERR09G05730 MMR_HSR1 PF01926 6.2e-08 13
LPERR09G05730 MMR_HSR1 PF01926 6.6e-08 14
LPERR09G05730 MMR_HSR1 PF01926 6.7e-08 15
LPERR09G05730 MMR_HSR1 PF01926 7e-08 16
LPERR09G05730 MMR_HSR1 PF01926 2.4e-06 17
LPERR09G05730 MMR_HSR1 PF01926 2.5e-06 18
LPERR09G05730 IF-2 PF11987 1.6e-29 19
LPERR09G05730 IF-2 PF11987 1.7e-29 20
LPERR09G05730 IF-2 PF11987 1.7e-29 21
LPERR09G05730 IF-2 PF11987 1.3e-19 22
LPERR09G05730 IF-2 PF11987 1.4e-19 23
LPERR09G05730 IF-2 PF11987 1.4e-19 24

RNA binding proteomes (RBPomes)

Pubmed ID Full Name Cell Author Time Doi

Literatures on RNA binding capacity

Pubmed ID Title Author Time Journal

Transcripts

Name Transcript ID bp Protein Translation ID
- LPERR09G05730.1 3107 928aa LPERR09G05730.1
- LPERR09G05730.2 3125 934aa LPERR09G05730.2
- LPERR09G05730.3 3026 901aa LPERR09G05730.3
- LPERR09G05730.4 2813 830aa LPERR09G05730.4
- LPERR09G05730.5 2795 824aa LPERR09G05730.5
- LPERR09G05730.6 2714 797aa LPERR09G05730.6

Gene Model

Pathways

Pathway ID Pathway Name Source

Phenotypes

ensgID Trait pValue Pubmed ID

GWAS

ensgIDSNPChromosomePosition TraitPubmedIDOr or BEAT EFO ID

Protein-Protein Interaction (PPI)

Paralogs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
LPERR09G05730

Orthologs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
LPERR09G05730

Gene Ontology

Go ID Go term No. evidence Entries Species Category

Expression