RBPWorld - a comprehensive database of RNA Binding Proteins

Welcome to

RBP World!

Description

Ensembl ID	Jr15_00260	Gene ID		Accession	-
Symbol		Alias	-	Full Name	NA
Status	Confidence	Length	8349 bases	Strand	Plus strand
Position	15 : 239267 - 247615	RNA binding domain	LSM14 , SM-ATX , FDF
Summary	N.A.

RNA binding domains (RBDs)

Protein	Domain	Pfam ID	E-value	Domain number
cds	LSM14	PF12701	2.1e-31	1
cds	SM-ATX	PF14438	5.8e-11	2
cds	FDF	PF09532	6.7e-13	3

RNA binding proteomes (RBPomes)

Pubmed ID	Full Name	Cell	Author	Time	Doi

Literatures on RNA binding capacity

Pubmed ID	Title	Author	Time	Journal

Transcripts

Name	Transcript ID	bp	Protein	Translation ID
-	Jr15_00260_p1	1737	578aa	cds.Jr15_00260_p1

Gene Model

Click here to download Jr15_00260's gene model file

Pathways

Pathway ID	Pathway Name	Source

Phenotypes

ensgID	Trait	pValue	Pubmed ID

GWAS

ensgID	SNP	Chromosome	Position	Trait	PubmedID	Or or BEAT	EFO ID

Protein-Protein Interaction (PPI)

Click here to download Jr15_00260's PPI file

Paralogs

Ensembl ID	Source				Target
Ensembl ID	Species	Protein ID	Perc_pos	Perc_id	Species	Protein ID	Perc_pos	Perc_id
Jr15_00260

Orthologs

Ensembl ID	Source				Target
Ensembl ID	Species	Protein ID	Perc_pos	Perc_id	Species	Protein ID	Perc_pos	Perc_id
Jr15_00260

Gene Ontology

Go ID	Go term	No. evidence	Entries	Species	Category

Expression