RBPWorld - a comprehensive database of RNA Binding Proteins

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RBP World!

Description

Ensembl ID	Jr14_09370	Gene ID		Accession	-
Symbol		Alias	-	Full Name	NA
Status	Confidence	Length	2911 bases	Strand	Plus strand
Position	14 : 7368559 - 7371469	RNA binding domain	Ribosomal_L10 , Ribosomal_60s
Summary	N.A.

RNA binding domains (RBDs)

Protein	Domain	Pfam ID	E-value	Domain number
cds	Ribosomal_L10	PF00466	2.9e-18	1
cds	Ribosomal_60s	PF00428	1.5e-15	2

RNA binding proteomes (RBPomes)

Pubmed ID	Full Name	Cell	Author	Time	Doi

Literatures on RNA binding capacity

Pubmed ID	Title	Author	Time	Journal

Transcripts

Name	Transcript ID	bp	Protein	Translation ID
-	Jr14_09370_p1	1299	321aa	cds.Jr14_09370_p1

Gene Model

Click here to download Jr14_09370's gene model file

Pathways

Pathway ID	Pathway Name	Source

Phenotypes

ensgID	Trait	pValue	Pubmed ID

GWAS

ensgID	SNP	Chromosome	Position	Trait	PubmedID	Or or BEAT	EFO ID

Protein-Protein Interaction (PPI)

Click here to download Jr14_09370's PPI file

Paralogs

Ensembl ID	Source				Target
Ensembl ID	Species	Protein ID	Perc_pos	Perc_id	Species	Protein ID	Perc_pos	Perc_id
Jr14_09370

Orthologs

Ensembl ID	Source				Target
Ensembl ID	Species	Protein ID	Perc_pos	Perc_id	Species	Protein ID	Perc_pos	Perc_id
Jr14_09370

Gene Ontology

Go ID	Go term	No. evidence	Entries	Species	Category

Expression