RBPWorld - a comprehensive database of RNA Binding Proteins

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RBP World!

Description

Ensembl ID	Jr11_28400	Gene ID		Accession	-
Symbol		Alias	-	Full Name	NA
Status	Confidence	Length	3508 bases	Strand	Minus strand
Position	11 : 35166627 - 35170134	RNA binding domain	Endonuclease_5
Summary	N.A.

RNA binding domains (RBDs)

Protein	Domain	Pfam ID	E-value	Domain number
cds	Endonuclease_5	PF04493	1.3e-40	1
cds	Endonuclease_5	PF04493	1.3e-40	2

RNA binding proteomes (RBPomes)

Pubmed ID	Full Name	Cell	Author	Time	Doi

Literatures on RNA binding capacity

Pubmed ID	Title	Author	Time	Journal

Transcripts

Name	Transcript ID	bp	Protein	Translation ID
-	Jr11_28400_p1	852	283aa	cds.Jr11_28400_p1

Gene Model

Click here to download Jr11_28400's gene model file

Pathways

Pathway ID	Pathway Name	Source

Phenotypes

ensgID	Trait	pValue	Pubmed ID

GWAS

ensgID	SNP	Chromosome	Position	Trait	PubmedID	Or or BEAT	EFO ID

Protein-Protein Interaction (PPI)

Click here to download Jr11_28400's PPI file

Paralogs

Ensembl ID	Source				Target
Ensembl ID	Species	Protein ID	Perc_pos	Perc_id	Species	Protein ID	Perc_pos	Perc_id
Jr11_28400

Orthologs

Ensembl ID	Source				Target
Ensembl ID	Species	Protein ID	Perc_pos	Perc_id	Species	Protein ID	Perc_pos	Perc_id
Jr11_28400

Gene Ontology

Go ID	Go term	No. evidence	Entries	Species	Category

Expression