Description

Ensembl ID Gasu_40590 Gene ID Accession -
Symbol Alias - Full Name
Status Confidence Length 9719 bases Strand Plus strand
Position scaf_35 : 116671 - 126389 RNA binding domain RNA_pol_Rpb1_4 , RNA_pol_Rpb1_1 , RNA_pol_Rpb2_1 , RNA_pol_Rpb1_5 , RNA_pol_Rpb2_3 , RNA_pol_Rpb1_2 , RNA_pol_Rpb2_7 , RNA_pol_Rpb1_3 , RNA_pol_Rpb2_2 , RNA_pol_Rpb2_45 , RNA_pol_Rpb2_6
Summary N.A.

RNA binding domains (RBDs)

Protein Domain Pfam ID E-value Domain number
EME28514 RNA_pol_Rpb1_4 PF05000 1.3e-16 1
EME28514 RNA_pol_Rpb1_1 PF04997 1.3e-72 2
EME28514 RNA_pol_Rpb2_1 PF04563 7e-18 3
EME28514 RNA_pol_Rpb1_5 PF04998 5e-50 4
EME28514 RNA_pol_Rpb1_5 PF04998 5e-50 5
EME28514 RNA_pol_Rpb2_3 PF04565 3.3e-28 6
EME28514 RNA_pol_Rpb1_2 PF00623 3.6e-39 7
EME28514 RNA_pol_Rpb1_2 PF00623 3.6e-39 8
EME28514 RNA_pol_Rpb2_7 PF04560 2.4e-23 9
EME28514 RNA_pol_Rpb1_3 PF04983 8e-23 10
EME28514 RNA_pol_Rpb2_2 PF04561 6.7e-37 11
EME28514 RNA_pol_Rpb2_45 PF10385 4.5e-16 12
EME28514 RNA_pol_Rpb2_6 PF00562 5.2e-151 13

RNA binding proteomes (RBPomes)

Pubmed ID Full Name Cell Author Time Doi

Literatures on RNA binding capacity

Pubmed ID Title Author Time Journal

Transcripts

Name Transcript ID bp Protein Translation ID
- EME28514 9436 3132aa EME28514

Pathways

Pathway ID Pathway Name Source

Phenotypes

ensgID Trait pValue Pubmed ID

GWAS

ensgIDSNPChromosomePosition TraitPubmedIDOr or BEAT EFO ID

Protein-Protein Interaction (PPI)

Paralogs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
Gasu_40590

Orthologs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
Gasu_40590

Gene Ontology

Go ID Go term No. evidence Entries Species Category

Expression