RBPWorld - a comprehensive database of RNA Binding Proteins

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RBP World!

Description

Ensembl ID	GSCOC_T00039283001	Gene ID		Accession	-
Symbol		Alias	-	Full Name	NA
Status	Confidence	Length	4346 bases	Strand	Plus strand
Position	1 : 11083890 - 11088235	RNA binding domain	Ribosomal_L9_N , Ribosomal_L9_C
Summary	N.A.

RNA binding domains (RBDs)

Protein	Domain	Pfam ID	E-value	Domain number
CDP14086	Ribosomal_L9_N	PF01281	9.6e-13	1
CDP14086	Ribosomal_L9_C	PF03948	1e-05	2

RNA binding proteomes (RBPomes)

Pubmed ID	Full Name	Cell	Author	Time	Doi

Literatures on RNA binding capacity

Pubmed ID	Title	Author	Time	Journal

Transcripts

Name	Transcript ID	bp	Protein	Translation ID
-	CDP14086	1553	201aa	CDP14086

Gene Model

Click here to download GSCOC_T00039283001's gene model file

Pathways

Pathway ID	Pathway Name	Source

Phenotypes

ensgID	Trait	pValue	Pubmed ID

GWAS

ensgID	SNP	Chromosome	Position	Trait	PubmedID	Or or BEAT	EFO ID

Protein-Protein Interaction (PPI)

Click here to download GSCOC_T00039283001's PPI file

Paralogs

Ensembl ID	Source				Target
Ensembl ID	Species	Protein ID	Perc_pos	Perc_id	Species	Protein ID	Perc_pos	Perc_id
GSCOC_T00039283001

Orthologs

Ensembl ID	Source				Target
Ensembl ID	Species	Protein ID	Perc_pos	Perc_id	Species	Protein ID	Perc_pos	Perc_id
GSCOC_T00039283001

Gene Ontology

Go ID	Go term	No. evidence	Entries	Species	Category

Expression