RBPWorld - a comprehensive database of RNA Binding Proteins

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RBP World!

Description

Ensembl ID	GSCOC_T00025629001	Gene ID		Accession	-
Symbol		Alias	-	Full Name	Gb
Status	Confidence	Length	8956 bases	Strand	Minus strand
Position	3 : 316689 - 325644	RNA binding domain	NFACT-R_1 , zf-CCHC
Summary	N.A.

RNA binding domains (RBDs)

Protein	Domain	Pfam ID	E-value	Domain number
CDO98728	NFACT-R_1	PF05670	2.4e-33	1
CDO98728	zf-CCHC	PF00098	2.8e-06	2

RNA binding proteomes (RBPomes)

Pubmed ID	Full Name	Cell	Author	Time	Doi

Literatures on RNA binding capacity

Pubmed ID	Title	Author	Time	Journal

Transcripts

Name	Transcript ID	bp	Protein	Translation ID
-	CDO98728	3800	1138aa	CDO98728

Gene Model

Click here to download GSCOC_T00025629001's gene model file

Pathways

Pathway ID	Pathway Name	Source

Phenotypes

ensgID	Trait	pValue	Pubmed ID

GWAS

ensgID	SNP	Chromosome	Position	Trait	PubmedID	Or or BEAT	EFO ID

Protein-Protein Interaction (PPI)

Click here to download GSCOC_T00025629001's PPI file

Paralogs

Ensembl ID	Source				Target
Ensembl ID	Species	Protein ID	Perc_pos	Perc_id	Species	Protein ID	Perc_pos	Perc_id
GSCOC_T00025629001

Orthologs

Ensembl ID	Source				Target
Ensembl ID	Species	Protein ID	Perc_pos	Perc_id	Species	Protein ID	Perc_pos	Perc_id
GSCOC_T00025629001

Gene Ontology

Go ID	Go term	No. evidence	Entries	Species	Category

Expression