RBPWorld - a comprehensive database of RNA Binding Proteins

Welcome to

RBP World!

Description

Ensembl ID	GSCOC_T00013600001	Gene ID		Accession	-
Symbol		Alias	-	Full Name	NA
Status	Confidence	Length	14628 bases	Strand	Plus strand
Position	scaffold_230 : 170778 - 185405	RNA binding domain	B5 , B3_4
Summary	N.A.

RNA binding domains (RBDs)

Protein	Domain	Pfam ID	E-value	Domain number
CDP18362	B5	PF03484	6.1e-23	1
CDP18362	B3_4	PF03483	4.1e-25	2

RNA binding proteomes (RBPomes)

Pubmed ID	Full Name	Cell	Author	Time	Doi

Literatures on RNA binding capacity

Pubmed ID	Title	Author	Time	Journal

Transcripts

Name	Transcript ID	bp	Protein	Translation ID
-	CDP18362	2300	593aa	CDP18362

Gene Model

Click here to download GSCOC_T00013600001's gene model file

Pathways

Pathway ID	Pathway Name	Source

Phenotypes

ensgID	Trait	pValue	Pubmed ID

GWAS

ensgID	SNP	Chromosome	Position	Trait	PubmedID	Or or BEAT	EFO ID

Protein-Protein Interaction (PPI)

Click here to download GSCOC_T00013600001's PPI file

Paralogs

Ensembl ID	Source				Target
Ensembl ID	Species	Protein ID	Perc_pos	Perc_id	Species	Protein ID	Perc_pos	Perc_id
GSCOC_T00013600001

Orthologs

Ensembl ID	Source				Target
Ensembl ID	Species	Protein ID	Perc_pos	Perc_id	Species	Protein ID	Perc_pos	Perc_id
GSCOC_T00013600001

Gene Ontology

Go ID	Go term	No. evidence	Entries	Species	Category

Expression