RBPWorld - a comprehensive database of RNA Binding Proteins

Welcome to

RBP World!

Description

Ensembl ID	GSBRNA2T00018875001	Gene ID		Accession	-
Symbol	BnaA06g37110D	Alias	-	Full Name	5'-3' exoribonuclease
Status	Confidence	Length	6784 bases	Strand	Minus strand
Position	LK032130 : 449257 - 456040	RNA binding domain	XRN_N , zf-CCHC
Summary	N.A.

RNA binding domains (RBDs)

Protein	Domain	Pfam ID	E-value	Domain number
CDY22389	XRN_N	PF03159	1.1e-96	1
CDY22389	zf-CCHC	PF00098	0.00035	2

RNA binding proteomes (RBPomes)

Pubmed ID	Full Name	Cell	Author	Time	Doi

Literatures on RNA binding capacity

Pubmed ID	Title	Author	Time	Journal

Transcripts

Name	Transcript ID	bp	Protein	Translation ID
-	CDY22389	3055	993aa	CDY22389

Gene Model

Click here to download GSBRNA2T00018875001's gene model file

Pathways

Pathway ID	Pathway Name	Source

Phenotypes

ensgID	Trait	pValue	Pubmed ID

GWAS

ensgID	SNP	Chromosome	Position	Trait	PubmedID	Or or BEAT	EFO ID

Protein-Protein Interaction (PPI)

Click here to download GSBRNA2T00018875001's PPI file

Paralogs

Ensembl ID	Source				Target
Ensembl ID	Species	Protein ID	Perc_pos	Perc_id	Species	Protein ID	Perc_pos	Perc_id
GSBRNA2T00018875001

Orthologs

Ensembl ID	Source				Target
Ensembl ID	Species	Protein ID	Perc_pos	Perc_id	Species	Protein ID	Perc_pos	Perc_id
GSBRNA2T00018875001

Gene Ontology

Go ID	Go term	No. evidence	Entries	Species	Category

Expression