RBPWorld - a comprehensive database of RNA Binding Proteins

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RBP World!

Description

Ensembl ID	GSBRNA2T00013244001	Gene ID		Accession	-
Symbol	BnaC06g01190D	Alias	-	Full Name	BnaC06g01190D protein
Status	Confidence	Length	1851 bases	Strand	Minus strand
Position	LK032114 : 110996 - 112846	RNA binding domain	RTC_insert , RTC
Summary	N.A.

RNA binding domains (RBDs)

Protein	Domain	Pfam ID	E-value	Domain number
CDY20899	RTC_insert	PF05189	2.1e-29	1
CDY20899	RTC	PF01137	4.8e-52	2

RNA binding proteomes (RBPomes)

Pubmed ID	Full Name	Cell	Author	Time	Doi

Literatures on RNA binding capacity

Pubmed ID	Title	Author	Time	Journal

Transcripts

Name	Transcript ID	bp	Protein	Translation ID
-	CDY20899	1252	377aa	CDY20899

Gene Model

Click here to download GSBRNA2T00013244001's gene model file

Pathways

Pathway ID	Pathway Name	Source

Phenotypes

ensgID	Trait	pValue	Pubmed ID

GWAS

ensgID	SNP	Chromosome	Position	Trait	PubmedID	Or or BEAT	EFO ID

Protein-Protein Interaction (PPI)

Click here to download GSBRNA2T00013244001's PPI file

Paralogs

Ensembl ID	Source				Target
Ensembl ID	Species	Protein ID	Perc_pos	Perc_id	Species	Protein ID	Perc_pos	Perc_id
GSBRNA2T00013244001

Orthologs

Ensembl ID	Source				Target
Ensembl ID	Species	Protein ID	Perc_pos	Perc_id	Species	Protein ID	Perc_pos	Perc_id
GSBRNA2T00013244001

Gene Ontology

Go ID	Go term	No. evidence	Entries	Species	Category

Expression