Description

Ensembl ID GQ55_1G048000 Gene ID Accession -
Symbol Alias - Full Name suppressor of abi3-5
Status Confidence Length 7895 bases Strand Minus strand
Position 1 : 2888192 - 2896086 RNA binding domain G-patch , OCRE , RRM_1
Summary N.A.

RNA binding domains (RBDs)

Protein Domain Pfam ID E-value Domain number
PUZ74225 G-patch PF01585 9.2e-14 1
PUZ74225 OCRE PF17780 2.4e-19 2
PUZ74225 RRM_1 PF00076 4.5e-33 3
PUZ74225 RRM_1 PF00076 4.5e-33 4
PUZ74226 G-patch PF01585 9.2e-14 1
PUZ74226 OCRE PF17780 2.4e-19 2
PUZ74226 RRM_1 PF00076 4.5e-33 3
PUZ74226 RRM_1 PF00076 4.5e-33 4
PUZ74227 G-patch PF01585 9.3e-14 1
PUZ74227 OCRE PF17780 2.4e-19 2
PUZ74227 RRM_1 PF00076 4.6e-33 3
PUZ74227 RRM_1 PF00076 4.6e-33 4
PUZ74230 G-patch PF01585 9.3e-14 1
PUZ74230 OCRE PF17780 2.4e-19 2
PUZ74230 RRM_1 PF00076 4.6e-33 3
PUZ74230 RRM_1 PF00076 4.6e-33 4
PUZ74228 G-patch PF01585 9.8e-14 1
PUZ74228 OCRE PF17780 2.2e-19 2
PUZ74228 RRM_1 PF00076 5e-33 3
PUZ74228 RRM_1 PF00076 5e-33 4
PUZ74229 G-patch PF01585 9.9e-14 1
PUZ74229 OCRE PF17780 2.2e-19 2
PUZ74229 RRM_1 PF00076 5e-33 3
PUZ74229 RRM_1 PF00076 5e-33 4
PUZ74223 OCRE PF17780 1.7e-19 1
PUZ74223 RRM_1 PF00076 3.7e-33 2
PUZ74223 RRM_1 PF00076 3.7e-33 3
PUZ74224 OCRE PF17780 1.7e-19 1
PUZ74224 RRM_1 PF00076 3.7e-33 2
PUZ74224 RRM_1 PF00076 3.7e-33 3
PUZ74222 OCRE PF17780 1.9e-19 1
PUZ74222 RRM_1 PF00076 3.2e-33 2
PUZ74222 RRM_1 PF00076 3.2e-33 3
PUZ74231 OCRE PF17780 1.9e-19 1
PUZ74231 RRM_1 PF00076 3.3e-33 2
PUZ74231 RRM_1 PF00076 3.3e-33 3

RNA binding proteomes (RBPomes)

Pubmed ID Full Name Cell Author Time Doi

Literatures on RNA binding capacity

Pubmed ID Title Author Time Journal

Transcripts

Name Transcript ID bp Protein Translation ID
- PUZ74222 5368 866aa PUZ74222
- PUZ74228 3102 1033aa PUZ74228
- PUZ74229 3105 1034aa PUZ74229
- PUZ74227 4807 995aa PUZ74227
- PUZ74223 5506 912aa PUZ74223
- PUZ74226 2967 988aa PUZ74226
- PUZ74225 2964 987aa PUZ74225
- PUZ74231 5371 867aa PUZ74231
- PUZ74230 2991 996aa PUZ74230
- PUZ74224 2742 913aa PUZ74224

Gene Model

Pathways

Pathway ID Pathway Name Source

Phenotypes

ensgID Trait pValue Pubmed ID

GWAS

ensgIDSNPChromosomePosition TraitPubmedIDOr or BEAT EFO ID

Protein-Protein Interaction (PPI)

Paralogs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
GQ55_1G048000

Orthologs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
GQ55_1G048000

Gene Ontology

Go ID Go term No. evidence Entries Species Category

Expression