Description

Ensembl ID GQ55_1G005200 Gene ID Accession -
Symbol Alias - Full Name Putative pentatricopeptide repeat-containing protein At1g68930
Status Confidence Length 3509 bases Strand Minus strand
Position 1 : 381911 - 385419 RNA binding domain PPR_3 , PPR
Summary N.A.

RNA binding domains (RBDs)

Protein Domain Pfam ID E-value Domain number
PUZ73659 PPR_3 PF13812 1.3e-25 1
PUZ73659 PPR_3 PF13812 1.3e-25 2
PUZ73659 PPR PF01535 1.1e-69 3
PUZ73659 PPR PF01535 1.1e-69 4
PUZ73659 PPR PF01535 1.1e-69 5
PUZ73659 PPR PF01535 1.1e-69 6
PUZ73659 PPR PF01535 1.1e-69 7
PUZ73659 PPR PF01535 1.1e-69 8
PUZ73659 PPR PF01535 1.1e-69 9
PUZ73659 PPR PF01535 1.1e-69 10
PUZ73659 PPR PF01535 1.1e-69 11
PUZ73659 PPR PF01535 1.1e-69 12
PUZ73659 PPR PF01535 1.1e-69 13
PUZ73660 PPR_3 PF13812 1.3e-25 1
PUZ73660 PPR_3 PF13812 1.3e-25 2
PUZ73660 PPR PF01535 1.1e-69 3
PUZ73660 PPR PF01535 1.1e-69 4
PUZ73660 PPR PF01535 1.1e-69 5
PUZ73660 PPR PF01535 1.1e-69 6
PUZ73660 PPR PF01535 1.1e-69 7
PUZ73660 PPR PF01535 1.1e-69 8
PUZ73660 PPR PF01535 1.1e-69 9
PUZ73660 PPR PF01535 1.1e-69 10
PUZ73660 PPR PF01535 1.1e-69 11
PUZ73660 PPR PF01535 1.1e-69 12
PUZ73660 PPR PF01535 1.1e-69 13

RNA binding proteomes (RBPomes)

Pubmed ID Full Name Cell Author Time Doi

Literatures on RNA binding capacity

Pubmed ID Title Author Time Journal

Transcripts

Name Transcript ID bp Protein Translation ID
- PUZ73659 3509 747aa PUZ73659
- PUZ73660 3507 747aa PUZ73660

Gene Model

Pathways

Pathway ID Pathway Name Source

Phenotypes

ensgID Trait pValue Pubmed ID

GWAS

ensgIDSNPChromosomePosition TraitPubmedIDOr or BEAT EFO ID

Protein-Protein Interaction (PPI)

Paralogs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
GQ55_1G005200

Orthologs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
GQ55_1G005200

Gene Ontology

Go ID Go term No. evidence Entries Species Category

Expression