Description

Ensembl ID FRAEX38873_v2_000156720 Gene ID Accession -
Symbol Alias - Full Name NA
Status Confidence Length 8093 bases Strand Plus strand
Position FTPI01002899.1 : 83661 - 91753 RNA binding domain RNA_pol_Rpb2_1 , RNA_pol_Rpb2_3 , RNA_pol_Rpb2_7 , RNA_pol_Rpb2_2 , RNA_pol_Rpb2_6 , RNA_pol_Rpb2_4 , RNA_pol_Rpb2_5
Summary N.A.

RNA binding domains (RBDs)

Protein Domain Pfam ID E-value Domain number
FRAEX38873_v2_000156720 RNA_pol_Rpb2_1 PF04563 7.2e-75 1
FRAEX38873_v2_000156720 RNA_pol_Rpb2_1 PF04563 9.7e-75 2
FRAEX38873_v2_000156720 RNA_pol_Rpb2_3 PF04565 1.8e-25 3
FRAEX38873_v2_000156720 RNA_pol_Rpb2_3 PF04565 2.1e-25 4
FRAEX38873_v2_000156720 RNA_pol_Rpb2_7 PF04560 1.4e-36 5
FRAEX38873_v2_000156720 RNA_pol_Rpb2_7 PF04560 1.9e-36 6
FRAEX38873_v2_000156720 RNA_pol_Rpb2_2 PF04561 4.6e-57 7
FRAEX38873_v2_000156720 RNA_pol_Rpb2_2 PF04561 5.4e-57 8
FRAEX38873_v2_000156720 RNA_pol_Rpb2_6 PF00562 1.4e-180 9
FRAEX38873_v2_000156720 RNA_pol_Rpb2_6 PF00562 1.4e-180 10
FRAEX38873_v2_000156720 RNA_pol_Rpb2_6 PF00562 1.6e-125 11
FRAEX38873_v2_000156720 RNA_pol_Rpb2_4 PF04566 5.2e-22 12
FRAEX38873_v2_000156720 RNA_pol_Rpb2_4 PF04566 6.4e-22 13
FRAEX38873_v2_000156720 RNA_pol_Rpb2_5 PF04567 1.8e-16 14
FRAEX38873_v2_000156720 RNA_pol_Rpb2_5 PF04567 2.9e-16 15

RNA binding proteomes (RBPomes)

Pubmed ID Full Name Cell Author Time Doi

Literatures on RNA binding capacity

Pubmed ID Title Author Time Journal

Transcripts

Name Transcript ID bp Protein Translation ID
- FRAEX38873_v2_000156720.2 4186 1190aa FRAEX38873_v2_000156720.2.cds
- FRAEX38873_v2_000156720.1 4900 1403aa FRAEX38873_v2_000156720.1.cds

Pathways

Pathway ID Pathway Name Source

Phenotypes

ensgID Trait pValue Pubmed ID

GWAS

ensgIDSNPChromosomePosition TraitPubmedIDOr or BEAT EFO ID

Paralogs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
FRAEX38873_v2_000156720

Orthologs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
FRAEX38873_v2_000156720

Gene Ontology

Go ID Go term No. evidence Entries Species Category

Expression