RBP Type |
N.A. |
Diseases |
|
Drug |
|
Main interacting RNAs |
|
Moonlighting functions |
|
Localizations |
|
BulkPerturb-seq
|
|
Ensembl ID | FRAEX38873_v2_000156720 | Gene ID |
|
Accession |
- |
Symbol |
|
Alias |
- |
Full Name |
NA |
Status |
Confidence |
Length |
8093 bases |
Strand |
Plus strand |
Position |
FTPI01002899.1 : 83661 - 91753 |
RNA binding domain |
RNA_pol_Rpb2_1 , RNA_pol_Rpb2_3 , RNA_pol_Rpb2_7 , RNA_pol_Rpb2_2 , RNA_pol_Rpb2_6 , RNA_pol_Rpb2_4 , RNA_pol_Rpb2_5 |
Summary |
N.A. |
RNA binding domains (RBDs)
Protein |
Domain |
Pfam ID |
E-value |
Domain number |
FRAEX38873_v2_000156720 |
RNA_pol_Rpb2_1 |
PF04563 |
7.2e-75 |
1 |
FRAEX38873_v2_000156720 |
RNA_pol_Rpb2_1 |
PF04563 |
9.7e-75 |
2 |
FRAEX38873_v2_000156720 |
RNA_pol_Rpb2_3 |
PF04565 |
1.8e-25 |
3 |
FRAEX38873_v2_000156720 |
RNA_pol_Rpb2_3 |
PF04565 |
2.1e-25 |
4 |
FRAEX38873_v2_000156720 |
RNA_pol_Rpb2_7 |
PF04560 |
1.4e-36 |
5 |
FRAEX38873_v2_000156720 |
RNA_pol_Rpb2_7 |
PF04560 |
1.9e-36 |
6 |
FRAEX38873_v2_000156720 |
RNA_pol_Rpb2_2 |
PF04561 |
4.6e-57 |
7 |
FRAEX38873_v2_000156720 |
RNA_pol_Rpb2_2 |
PF04561 |
5.4e-57 |
8 |
FRAEX38873_v2_000156720 |
RNA_pol_Rpb2_6 |
PF00562 |
1.4e-180 |
9 |
FRAEX38873_v2_000156720 |
RNA_pol_Rpb2_6 |
PF00562 |
1.4e-180 |
10 |
FRAEX38873_v2_000156720 |
RNA_pol_Rpb2_6 |
PF00562 |
1.6e-125 |
11 |
FRAEX38873_v2_000156720 |
RNA_pol_Rpb2_4 |
PF04566 |
5.2e-22 |
12 |
FRAEX38873_v2_000156720 |
RNA_pol_Rpb2_4 |
PF04566 |
6.4e-22 |
13 |
FRAEX38873_v2_000156720 |
RNA_pol_Rpb2_5 |
PF04567 |
1.8e-16 |
14 |
FRAEX38873_v2_000156720 |
RNA_pol_Rpb2_5 |
PF04567 |
2.9e-16 |
15 |
RNA binding proteomes (RBPomes)
Pubmed ID |
Full Name |
Cell |
Author |
Time |
Doi |
Literatures on RNA binding capacity
Pubmed ID |
Title |
Author |
Time |
Journal |
Name |
Transcript ID |
bp |
Protein |
Translation ID |
- |
FRAEX38873_v2_000156720.2 |
4186 |
1190aa |
FRAEX38873_v2_000156720.2.cds |
- |
FRAEX38873_v2_000156720.1 |
4900 |
1403aa |
FRAEX38873_v2_000156720.1.cds |
Pathway ID |
Pathway Name |
Source |
| | |
ensgID |
Trait |
pValue |
Pubmed ID |
ensgID | SNP | Chromosome | Position |
Trait | PubmedID | Or or BEAT |
EFO ID |
Protein-Protein Interaction (PPI)
Ensembl ID |
Source |
Target |
Species |
Protein ID |
Perc_pos |
Perc_id |
Species |
Protein ID |
Perc_pos |
Perc_id |
FRAEX38873_v2_000156720 | | | | | | | | |
Ensembl ID |
Source |
Target |
Species |
Protein ID |
Perc_pos |
Perc_id |
Species |
Protein ID |
Perc_pos |
Perc_id |
FRAEX38873_v2_000156720 | | | | | | | | |
Go ID |
Go term |
No. evidence |
Entries |
Species |
Category |