RBP Type |
N.A. |
Diseases |
|
Drug |
|
Main interacting RNAs |
|
Moonlighting functions |
|
Localizations |
|
BulkPerturb-seq
|
|
Ensembl ID | FRAEX38873_v2_000039490 | Gene ID |
|
Accession |
- |
Symbol |
|
Alias |
- |
Full Name |
NA |
Status |
Confidence |
Length |
8677 bases |
Strand |
Minus strand |
Position |
FTPI01001367.1 : 172457 - 181133 |
RNA binding domain |
RNA_pol_Rpb2_1 , RNA_pol_Rpb2_3 , RNA_pol_Rpb2_7 , RNA_pol_Rpb2_2 , RNA_pol_Rpb2_6 , RNA_pol_Rpb2_4 , RNA_pol_Rpb2_5 |
Summary |
N.A. |
RNA binding domains (RBDs)
Protein |
Domain |
Pfam ID |
E-value |
Domain number |
FRAEX38873_v2_000039490 |
RNA_pol_Rpb2_1 |
PF04563 |
3.2e-34 |
1 |
FRAEX38873_v2_000039490 |
RNA_pol_Rpb2_1 |
PF04563 |
4e-17 |
2 |
FRAEX38873_v2_000039490 |
RNA_pol_Rpb2_3 |
PF04565 |
1.5e-15 |
3 |
FRAEX38873_v2_000039490 |
RNA_pol_Rpb2_3 |
PF04565 |
2.1e-15 |
4 |
FRAEX38873_v2_000039490 |
RNA_pol_Rpb2_7 |
PF04560 |
4.2e-32 |
5 |
FRAEX38873_v2_000039490 |
RNA_pol_Rpb2_7 |
PF04560 |
5.3e-32 |
6 |
FRAEX38873_v2_000039490 |
RNA_pol_Rpb2_2 |
PF04561 |
8.3e-12 |
7 |
FRAEX38873_v2_000039490 |
RNA_pol_Rpb2_2 |
PF04561 |
8.4e-12 |
8 |
FRAEX38873_v2_000039490 |
RNA_pol_Rpb2_6 |
PF00562 |
1.2e-98 |
9 |
FRAEX38873_v2_000039490 |
RNA_pol_Rpb2_6 |
PF00562 |
1.6e-98 |
10 |
FRAEX38873_v2_000039490 |
RNA_pol_Rpb2_4 |
PF04566 |
4.6e-20 |
11 |
FRAEX38873_v2_000039490 |
RNA_pol_Rpb2_4 |
PF04566 |
5.9e-20 |
12 |
FRAEX38873_v2_000039490 |
RNA_pol_Rpb2_5 |
PF04567 |
3.1e-06 |
13 |
FRAEX38873_v2_000039490 |
RNA_pol_Rpb2_5 |
PF04567 |
3.7e-06 |
14 |
RNA binding proteomes (RBPomes)
Pubmed ID |
Full Name |
Cell |
Author |
Time |
Doi |
Literatures on RNA binding capacity
Pubmed ID |
Title |
Author |
Time |
Journal |
Name |
Transcript ID |
bp |
Protein |
Translation ID |
- |
FRAEX38873_v2_000039490.1 |
4286 |
1011aa |
FRAEX38873_v2_000039490.1.cds |
- |
FRAEX38873_v2_000039490.2 |
3911 |
1193aa |
FRAEX38873_v2_000039490.2.cds |
Pathway ID |
Pathway Name |
Source |
| | |
ensgID |
Trait |
pValue |
Pubmed ID |
ensgID | SNP | Chromosome | Position |
Trait | PubmedID | Or or BEAT |
EFO ID |
Protein-Protein Interaction (PPI)
Ensembl ID |
Source |
Target |
Species |
Protein ID |
Perc_pos |
Perc_id |
Species |
Protein ID |
Perc_pos |
Perc_id |
FRAEX38873_v2_000039490 | | | | | | | | |
Ensembl ID |
Source |
Target |
Species |
Protein ID |
Perc_pos |
Perc_id |
Species |
Protein ID |
Perc_pos |
Perc_id |
FRAEX38873_v2_000039490 | | | | | | | | |
Go ID |
Go term |
No. evidence |
Entries |
Species |
Category |