Description

Ensembl ID FCD_00015001 Gene ID Accession -
Symbol Alias - Full Name DEAD-box ATP-dependent RNA helicase 3, chloroplastic
Status Confidence Length 4953 bases Strand Minus strand
Position 3 : 15745907 - 15750859 RNA binding domain ResIII , DEAD , GUCT , zf-CCHC
Summary N.A.

RNA binding domains (RBDs)

Protein Domain Pfam ID E-value Domain number
FCD_00015001-RA:cds ResIII PF04851 2.1e-05 1
FCD_00015001-RA:cds DEAD PF00270 7.6e-48 2
FCD_00015001-RA:cds GUCT PF08152 6.6e-18 3
FCD_00015001-RA:cds zf-CCHC PF00098 2e-06 4

RNA binding proteomes (RBPomes)

Pubmed ID Full Name Cell Author Time Doi

Literatures on RNA binding capacity

Pubmed ID Title Author Time Journal

Transcripts

Name Transcript ID bp Protein Translation ID
- FCD_00015001-RA 2713 820aa FCD_00015001-RA:cds

Pathways

Pathway ID Pathway Name Source

Phenotypes

ensgID Trait pValue Pubmed ID

GWAS

ensgIDSNPChromosomePosition TraitPubmedIDOr or BEAT EFO ID

Protein-Protein Interaction (PPI)

Paralogs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
FCD_00015001

Orthologs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
FCD_00015001

Gene Ontology

Go ID Go term No. evidence Entries Species Category

Expression