RBPWorld - a comprehensive database of RNA Binding Proteins

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RBP World!

Description

Ensembl ID	FCD_00012400	Gene ID		Accession	-
Symbol		Alias	-	Full Name	transcription termination factor MTERF9, chloroplastic
Status	Confidence	Length	976 bases	Strand	Plus strand
Position	6 : 1851513 - 1852488	RNA binding domain	mTERF
Summary	N.A.

RNA binding domains (RBDs)

Protein	Domain	Pfam ID	E-value	Domain number
FCD_00012400-RA:cds	mTERF	PF02536	5.9e-32	1

RNA binding proteomes (RBPomes)

Pubmed ID	Full Name	Cell	Author	Time	Doi

Literatures on RNA binding capacity

Pubmed ID	Title	Author	Time	Journal

Transcripts

Name	Transcript ID	bp	Protein	Translation ID
-	FCD_00012400-RA	888	295aa	FCD_00012400-RA:cds

Gene Model

Click here to download FCD_00012400's gene model file

Pathways

Pathway ID	Pathway Name	Source

Phenotypes

ensgID	Trait	pValue	Pubmed ID

GWAS

ensgID	SNP	Chromosome	Position	Trait	PubmedID	Or or BEAT	EFO ID

Protein-Protein Interaction (PPI)

Click here to download FCD_00012400's PPI file

Paralogs

Ensembl ID	Source				Target
Ensembl ID	Species	Protein ID	Perc_pos	Perc_id	Species	Protein ID	Perc_pos	Perc_id
FCD_00012400

Orthologs

Ensembl ID	Source				Target
Ensembl ID	Species	Protein ID	Perc_pos	Perc_id	Species	Protein ID	Perc_pos	Perc_id
FCD_00012400

Gene Ontology

Go ID	Go term	No. evidence	Entries	Species	Category

Expression