RBPWorld - a comprehensive database of RNA Binding Proteins

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RBP World!

Description

Ensembl ID	FCD_00009844	Gene ID		Accession	-
Symbol		Alias	-	Full Name	U3 small nucleolar RNA-associated protein
Status	Confidence	Length	22366 bases	Strand	Minus strand
Position	4 : 10185020 - 10207385	RNA binding domain	U3snoRNP10
Summary	N.A.

RNA binding domains (RBDs)

Protein	Domain	Pfam ID	E-value	Domain number
FCD_00009844-RA:cds	U3snoRNP10	PF12397	4.8e-23	1

RNA binding proteomes (RBPomes)

Pubmed ID	Full Name	Cell	Author	Time	Doi

Literatures on RNA binding capacity

Pubmed ID	Title	Author	Time	Journal

Transcripts

Name	Transcript ID	bp	Protein	Translation ID
-	FCD_00009844-RA	7939	2522aa	FCD_00009844-RA:cds

Gene Model

Click here to download FCD_00009844's gene model file

Pathways

Pathway ID	Pathway Name	Source

Phenotypes

ensgID	Trait	pValue	Pubmed ID

GWAS

ensgID	SNP	Chromosome	Position	Trait	PubmedID	Or or BEAT	EFO ID

Protein-Protein Interaction (PPI)

Click here to download FCD_00009844's PPI file

Paralogs

Ensembl ID	Source				Target
Ensembl ID	Species	Protein ID	Perc_pos	Perc_id	Species	Protein ID	Perc_pos	Perc_id
FCD_00009844

Orthologs

Ensembl ID	Source				Target
Ensembl ID	Species	Protein ID	Perc_pos	Perc_id	Species	Protein ID	Perc_pos	Perc_id
FCD_00009844

Gene Ontology

Go ID	Go term	No. evidence	Entries	Species	Category

Expression